Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4473g00002 ATGCAGGTATCTCAGAAACATGAGATTTGCTTTGGCTCTGTGCAAACTCTGGAATCATATGACTCTTCCTTAGTTCAAGCCATAGAATCTTGCTCAACAAATAACAGTAATCCATCAGCTAATGGAAGCCCAGTATTAAAGCCACAAAATTCTCTTGAATCCTTCTTAACGCTGACACAAGACCTCGATGACCTTAGCTACAAGCTGCGCGAGCTGGAGACCGCGATGCTGGGACCTGATGCAGAAATTTCAGTCACATGTGATGTTGATGCAGTCATGTATGAAGCAGAGAAGTGGAATAAGACAATGGAGATGATATCTAGAGGAGACTTGAAAGAGATGCTTTGTGCTTGTGCATATGCAATGGCGGAGAGTGATATGGAGACGAGCGAATGGCTGATATCCAAGCTGCGAGAAATGGTGTCCATTTCTGGAAATCCTCTACAACGTTTAGGAGCATATGTGTTAGAGGCTCTTGTGGCTAGACTGTCCTCTTCAGGAAGCAAAATATGCAAATCCTTAAAATGCAAAGAGCCTACTGCTTCTGAACTCCTCTCCTATATGAATAAATTATATGAAATCTGCCCATACTTCAAATTTGGGTATTTATCAGCAAATGGGGCAATTGCTGAAGCCATGAAGCATGAAAATAAGGTTCATATAATTGATTTTCAGATAAACCAAGGCATCCAGTGGGTGAGTCTCATCCGAGCTCTCGCGTGCCGGCCAGGAGGGCCACCGGAGATTAGAATAACCGCTGTTGATGACTCCACTTCGGCTTTTTCCAGAGGAGGAGGGCTTGAGATTGTGGGGAAAAGGTTATCAGCACTTGCACAAGCATGTAATGTTCCATTTCAGTTCCTTGCTGTGGAAGTTTCTGCATCGGATGTTCATTTCCAACACTCCGAGATTTTACCCGGTGAAGCCATTGCTGTGAACTTCTTCATGATGCTGCATCATCTTCAAGATCAGACAATAGAGCGTTTGTTGAGATCAGTCAATTCCTTGAGTCCCAAGGTGGTGACCCTTGTTGAGCCAGAAAATGAAACCAATCATGTTCCCTTCTTCCCACGTTTTGTTCAGACACTTAACTACTACTTGACCGTTTTTGAATCGATTGATGATGTCATGCCGAGGGATGACAGGGACAGGATCAATGTGGAACAGCATTGTTTGGCTCGAGAGATCGTGAACTTGATAGCATGTGAAGGGGAAGACAGAGTGGAACGGCATGAGACTTTGGAAACTTGGAACTCACGTTTCAGAATGGCAGGGTTTAGTCCATATCCATTGAGCTCATTCATTAATTTTACCATCAAGAATCTTCTGAAGGATTATTCCAGAAACTACACTCTACAAGAGAAAGATGGTGCCCTATACCTTGGTTGGATGAATCAGCCTCTTGTTTCATCTTGTGCTTGGAGGTGA 1428 0.4363 MQVSQKHEICFGSVQTLESYDSSLVQAIESCSTNNSNPSANGSPVLKPQNSLESFLTLTQDLDDLSYKLRELETAMLGPDAEISVTCDVDAVMYEAEKWNKTMEMISRGDLKEMLCACAYAMAESDMETSEWLISKLREMVSISGNPLQRLGAYVLEALVARLSSSGSKICKSLKCKEPTASELLSYMNKLYEICPYFKFGYLSANGAIAEAMKHENKVHIIDFQINQGIQWVSLIRALACRPGGPPEIRITAVDDSTSAFSRGGGLEIVGKRLSALAQACNVPFQFLAVEVSASDVHFQHSEILPGEAIAVNFFMMLHHLQDQTIERLLRSVNSLSPKVVTLVEPENETNHVPFFPRFVQTLNYYLTVFESIDDVMPRDDRDRINVEQHCLAREIVNLIACEGEDRVERHETLETWNSRFRMAGFSPYPLSSFINFTIKNLLKDYSRNYTLQEKDGALYLGWMNQPLVSSCAWR 475
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4473g00002 475 ProSiteProfiles GRAS family profile. 102 475 IPR005202 -
Pral4473g00002 475 Pfam GRAS domain family 112 475 IPR005202 -
Pral4473g00002 475 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 90 469 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4473g00002 Pral-Chr4473 34947 38704 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4473g00002 64 475 GRAS Transcription Factor Family AT1G50600 59.953 0.0 533
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Pral4473g00002 GRAS 3.8e-124 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4473g00002 - - pcin:129303763 806.979