Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4472g00002 ATGCATGAGTCTCAAGTGATCCACCATAACCATCAAATGGAGCTTCTCGATTCCTCAAAGTTGGAAATGTCTCCCGAAACGAGCTTTTTTCTCCAACCCATTTTCACTCACGGGCTTTCTTGTTCACTGCACCTGGCGCTACTACTTGTGTTACTGATAACATGGGCATGTCACAAAACCAAGGTTCGAAACAGAGAAACTGGAAGAATAGGAGTTTCCAATACTGCTGTTTTGTACTACAGACAGACTCTTTTCTGTTGTTTAATTGTTTTTGCTTTTAACCTTGTGCTGTCCGTACTAAACTTCTTTTTCTGGTACAAGAACGACAACTTTGATGAAATTGTTATTGCTGTGGATTTTGTGATAAAAACTGTTGCCTGGGGTGCTCTTTGTGTCTACTTGTATTCTAGACTCTCCAGTTCAGGGGAACAAGACTTCCCCAGATTCTTGAGAATTTGGTGCTGGGCTTACTCCTTTGTTTGCTGTTCTTGCCTTGTAATAGATTTTGTGCTCTACAGAAAACATGTTTTCCTCCCAATAATATACCTTATTTCTGATATTGGTTCCACTCTTTCGGGTCTGTTTTTCTGTTATGTGGGATTTTCAGCAAGCAATGAGGCAAAACGCGTCCTTCTTGAAGAACCCCTCTTGAGTAGTGATTACAGGGAAAGCAATAGCTATGAGTGCTATAAGAACACCCCTTACTCAAAAGCTGGATTTTTCAGTATTGTTACTTTCTCATGGATGAGTACTCTAATTGCTGTTGGATATAAGAAAACTTTAGGCCTTGAGGATCTCCCTTTGCTCTCTAGCCATGACAGTGTATACGGGACATTTCCAACATTTAGAAAAAACCTTGAATCAGTGTGTAGTGATGATCTTAGCAGAGTGACCACTATTAAACTGGTGAAGGCTTTAATCTACTCTACATGGAAAGGGATTCTCTCATCAGCTATATTTGCATTCTTTTACACATGTGCTTCTTATGTTGGTCCCTTTCTGATTGACGTATTTGTTGAATATCTGAATGGACAAGAAAGTTTTAAAAATGAGGGTTATATTTTGACAGTGGCATTCCTCAGTGGGAAACTTGTGGAGTGCCTTGCACAGAGGCACTGGATGTTTAGGTTCCAGCAAGTTGGGGTTAGGTTTCAGTCAATGTTAGTGGCAATGATCTATGCAAAAGGATTGACCCTTTCATGTCAATCAAAGGAGGGTCGAACTAGTGGGGAGATCATCAACTTAATGACTGTTGATGCTGCTAGGATTGGTGAGTTTTGTTGGTACATGCATGATCCATGGATGGCTGTTCTACAAGTAACTTTAGCTTTAGTTGTTCTATATAGAAGTGTTGGGATTGCTTCATTATCTGCTTTTGCTGCTACTGTTTTAATGATGCTGGCAAACTTGCCATTGGGGTCACTGCAAGAGAAGTTTCAGAGAAAGTTAATGGAGTCAAAAGACACAAGAATGAAGGCCACCACTGAGATTCTAAAGAACATGAGGATTCTAAAACTGCAGGCATGGGAGATGAAGTTCCTGTCAAGAGTTATTGAGATTAGGAACACTGAGACAGGATGGCTAAAGAAATTTTTATTCAGTTCAGGAATGACAAGATTCCTCTTCTCTTCTGCCCCAACTTTCATTGCTATGGTTACTTTTGGTACTTGTATTCTCATAGGAATCCCACTTGACTCAGGCAAGATCTTAGCTGCATTGGCAACTTTCAGAATTCTGCAGCAGCCCATATCTAACCTTCCTGACACAATCTCAATGATAGCACAAACTAAGGTTTCCCTCGATAGGATTGCATCATTCCTTTGTCTCCAGGAAATACAGTCTGATGTTGTAGAGAGGCTTCCTCGGGGTAGTTCTGATACAGCAATTGAGATAGTAGATGGGAACTTCTCTTGGGATTTGTCTTCACCTGTTCCTACCTTGCAAAATATAAACATCAACATAATCCATGGCTTCAGGGTTGCAGTTTGTGGTACTGTTGGTTCAGGAAAGTCAAGTCTACTTTCTTGTATACTAGGAGAAGTATCGAAGCTCTCTGGGACATTGAAGATGTGTGGTACAAAGGCTTATGTTGCTCAGTCCCCTTGGATACAAGGTGGAAAGATAGAGGAGAACGTACTATTTGGGAAAGAGATGGATAGGGAAAAATATGAGAAGATTTTAGAAGCATGTTCCTTGAAAAGAGACCTAGAAATTCTTCCTTTTGGTGATCAAACTGTTATTGGAGAGAGAGGCATCAATTTGAGTGGTGGACAGAAGCAAAGAGTACAAATAGCTCGTGCTCTTTACCAAGATGCTGATATATATATTCTTGATGATCCTTTCAGTGCCGTGGATGCCCATACCGGATCCCACCTGTTTAAGGAGTGTTTGCTTGGCCTTTTGAGTTCAAAAACAGTGTTATATGTGACTCATCAACTAGAGTTCTTACCTGATGCTGATCTAATATTGGTCATGAAAGATGGCAAGATAACTCAATCAGGTAAGTACAATGACATACTCAACTCAGGCACTGATTTTATGGAGCTTGTTGGAGCACATAGAGAAGCCTTATCTGCAATCAATTCGTTAGAGAGAAAACCCACCTTTAGAGAAACTAGTACCACTGCGAAAGAGACAGACTCATTAAGTGCATTTGGACTTGAGGAAGAAGTTGAAAACAAAGATGTTCAAAAAGAAGATGATAACCGTGGGCCAAAAGGCCAGCTTGTTCAAGAAGAAGAAAGAGAAAAGGGCAAAGTTGGGTTTGAAGTTTACTGGAAGTACATTACAACAGCATATGGAGGAGCTCTTGTACCTTTCATATTACTCTTGCATGTGCTTTTTCAGGTTTTTCAAATTGGAAGCAATTATTGGATGGCATTGGCAGCTCCTGTATCGGCAACTACAGAGCCTCCTGTTGGGAGCTTTACACTTTTGCTTGTCTATGTAGCTTTGGCCATTGCAAGTTCTTTCTGCAACATGGCTAGAACAATGCTTGTGTTTGTAGCTGGATATAAGACAGCCACTACACTCTTCAATAAACTGCACGTGTGCTTCTTCCGAGCCCCTATGTCGTTTTTTGATTCTACACCAAGTGGACGAATCCTAAATAGAGCTTCAACAGACCAAAGTGCAGTAGATATGAGCATTCCAATTACTGTAGCAGGAGTTGCCTTCTGCCTTATTCAGCTCTTGGCAAATATTGCTGTGATGTCTCAAATTGCATGGCAGGTTTTTTTAGTATTTATTCCTGTGGTTGCAGCTTGCATATGGTACCAGCGATACTACTCAGAATCAGCGCGTGAACTATCCCGTTTGGTTGGTACGTGTGAAGCTCCAGTTATACAGCATTTTTCAGAAACCATTTCAGGATCAATGACCATCAGAAGTTTTGACCAAGAAGCGAGATTTCAGGATACAAACATGAAACTGATAGACAGATATTCCAAGCCCAAGTTATACAGTACTGCTGCAATGGAATGGCTATGCTTCCGATTGGATATGTTATCTTCTATCACATTTGCCTTCAGTTTGGTTTTCTTGATATCTTTTCCAAATGCAATTAGTGCTCCTGAAGGCATTGCTGGCTTGGCTGTGACATATGGGTTTAATCTAAACATGCTGCAAGCTCAATTAATTTGGACGCTTTGCAATATGGAGAATAAAATTATATCAGTAGAAAGAATATTTCAGTATACTAACATCCCAAGCGAGCCTCCTCTTGTAATTGAAGAAAACAGACCAGATTGTTCATGGCCATCATATGGGGAGGTTCATATCCAGGATTTACAGGTCCGATATGCTCCTCACTTGCCTCTTGTGCTGCGAGGTCTTACATGCACATTCAATGCTGGGGTAAAAACAGGCATTGTGGGGAGAACTGGAAGTGGAAAATCAACTCTGGTGCAAACACTATTCAGGCTCATTGAACCTACAACTGGTCAGATACTAATAGACGGCATCGGCATCTCTTTGACTGGGCTTCACGATTTAAGGTCTAGACTTAGCATTATTCCTCAAGATCCAACTATGTTTCAAGGGACTGTAAGAAGTAATTTAGACCCGCTTGAAGAGTACACTGATGAACAGATTTGGGAGGCTCTAGCTATGTGCCAACTTGGAGATGAAGTCAGGAAGAAGGAAGGAAGGCTTGATTCCATTGTCACTGAGAATGGAGAAAATTGGAGTATGGGTCAGAGGCAACTGGTTTGCCTCGGCCGTGTTCTACTTAAAAAAAGCAGGATTTTGGTGCTTGATGAAGCTACTGCATCAGTTGATACTGCTACAGATAACATTATCCAACAGACCCTGAAGCAGCATTTCTCAGAATGTACAGTTATAACCATTGCACACAGAATAACTTCTATCCTTGACAGTGACATGGTTTTGGTTCTGAGCCAAGGGCTTATTGAGGAATATGACTCACCAAACAGATTGTTGAAGAACAAATCTTCATCTCTTGCTCAACTAGTTGCAGAATACTCTCGTAGGTCCAACTCGGGTTTTGAAGCTTAG 4515 0.4093 MHESQVIHHNHQMELLDSSKLEMSPETSFFLQPIFTHGLSCSLHLALLLVLLITWACHKTKVRNRETGRIGVSNTAVLYYRQTLFCCLIVFAFNLVLSVLNFFFWYKNDNFDEIVIAVDFVIKTVAWGALCVYLYSRLSSSGEQDFPRFLRIWCWAYSFVCCSCLVIDFVLYRKHVFLPIIYLISDIGSTLSGLFFCYVGFSASNEAKRVLLEEPLLSSDYRESNSYECYKNTPYSKAGFFSIVTFSWMSTLIAVGYKKTLGLEDLPLLSSHDSVYGTFPTFRKNLESVCSDDLSRVTTIKLVKALIYSTWKGILSSAIFAFFYTCASYVGPFLIDVFVEYLNGQESFKNEGYILTVAFLSGKLVECLAQRHWMFRFQQVGVRFQSMLVAMIYAKGLTLSCQSKEGRTSGEIINLMTVDAARIGEFCWYMHDPWMAVLQVTLALVVLYRSVGIASLSAFAATVLMMLANLPLGSLQEKFQRKLMESKDTRMKATTEILKNMRILKLQAWEMKFLSRVIEIRNTETGWLKKFLFSSGMTRFLFSSAPTFIAMVTFGTCILIGIPLDSGKILAALATFRILQQPISNLPDTISMIAQTKVSLDRIASFLCLQEIQSDVVERLPRGSSDTAIEIVDGNFSWDLSSPVPTLQNININIIHGFRVAVCGTVGSGKSSLLSCILGEVSKLSGTLKMCGTKAYVAQSPWIQGGKIEENVLFGKEMDREKYEKILEACSLKRDLEILPFGDQTVIGERGINLSGGQKQRVQIARALYQDADIYILDDPFSAVDAHTGSHLFKECLLGLLSSKTVLYVTHQLEFLPDADLILVMKDGKITQSGKYNDILNSGTDFMELVGAHREALSAINSLERKPTFRETSTTAKETDSLSAFGLEEEVENKDVQKEDDNRGPKGQLVQEEEREKGKVGFEVYWKYITTAYGGALVPFILLLHVLFQVFQIGSNYWMALAAPVSATTEPPVGSFTLLLVYVALAIASSFCNMARTMLVFVAGYKTATTLFNKLHVCFFRAPMSFFDSTPSGRILNRASTDQSAVDMSIPITVAGVAFCLIQLLANIAVMSQIAWQVFLVFIPVVAACIWYQRYYSESARELSRLVGTCEAPVIQHFSETISGSMTIRSFDQEARFQDTNMKLIDRYSKPKLYSTAAMEWLCFRLDMLSSITFAFSLVFLISFPNAISAPEGIAGLAVTYGFNLNMLQAQLIWTLCNMENKIISVERIFQYTNIPSEPPLVIEENRPDCSWPSYGEVHIQDLQVRYAPHLPLVLRGLTCTFNAGVKTGIVGRTGSGKSTLVQTLFRLIEPTTGQILIDGIGISLTGLHDLRSRLSIIPQDPTMFQGTVRSNLDPLEEYTDEQIWEALAMCQLGDEVRKKEGRLDSIVTENGENWSMGQRQLVCLGRVLLKKSRILVLDEATASVDTATDNIIQQTLKQHFSECTVITIAHRITSILDSDMVLVLSQGLIEEYDSPNRLLKNKSSSLAQLVAEYSRRSNSGFEA 1504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4472g00002 1504 FunFam ABC transporter C family member 5 901 1239 - -
Pral4472g00002 1504 FunFam ABC transporter C family member 5 614 861 - -
Pral4472g00002 1504 CDD ABC_6TM_ABCC_D2 938 1233 IPR044726 GO:0140359
Pral4472g00002 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 317 595 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4472g00002 1504 Pfam ABC transporter transmembrane region 317 582 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4472g00002 1504 Pfam ABC transporter transmembrane region 941 1182 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4472g00002 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1258 1492 IPR003439 GO:0005524
Pral4472g00002 1504 Gene3D - 611 873 IPR027417 -
Pral4472g00002 1504 Pfam ABC transporter 1275 1423 IPR003439 GO:0005524
Pral4472g00002 1504 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 235 1494 - -
Pral4472g00002 1504 Pfam ABC transporter 647 781 IPR003439 GO:0005524
Pral4472g00002 1504 FunFam ABC transporter C family member 10 298 611 - -
Pral4472g00002 1504 SUPERFAMILY ABC transporter transmembrane region 938 1240 IPR036640 GO:0005524|GO:0016020
Pral4472g00002 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 626 851 IPR027417 -
Pral4472g00002 1504 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 629 852 IPR003439 GO:0005524
Pral4472g00002 1504 CDD ABCC_MRP_domain1 629 829 - -
Pral4472g00002 1504 SMART AAA_5 1284 1469 IPR003593 GO:0016887
Pral4472g00002 1504 SMART AAA_5 656 829 IPR003593 GO:0016887
Pral4472g00002 1504 FunFam ABC transporter C family member 3 1241 1493 - -
Pral4472g00002 1504 ProSitePatterns ABC transporters family signature. 754 768 IPR017871 GO:0005524|GO:0016887
Pral4472g00002 1504 Gene3D ABC transporter type 1, transmembrane domain 293 610 IPR036640 GO:0005524|GO:0016020
Pral4472g00002 1504 Gene3D ABC transporter type 1, transmembrane domain 900 1239 IPR036640 GO:0005524|GO:0016020
Pral4472g00002 1504 MobiDBLite consensus disorder prediction 890 912 - -
Pral4472g00002 1504 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1250 1484 IPR027417 -
Pral4472g00002 1504 Gene3D - 1241 1494 IPR027417 -
Pral4472g00002 1504 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 940 1221 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4472g00002 1504 CDD ABC_6TM_ABCC_D1 317 603 IPR044746 GO:0140359
Pral4472g00002 1504 CDD ABCC_MRP_domain2 1256 1476 - -
Pral4472g00002 1504 SUPERFAMILY ABC transporter transmembrane region 306 607 IPR036640 GO:0005524|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4472g00002 Pral-Chr4472 12500 18607 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4472g00002 629 886 Calmodulin-binding Proteins AT2G36910 28.058 1.25e-26 117
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4472g00002 - K05666 gmx:106794105 2122.44