Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4471g00032 ATGAGTAAGAAAAAGAACCCTCTTGTGTTTCTAGACATCTCGATTGATGGGGATCCTGTGGAAAGAATTGTTATTGAGCTTTTTGCCAGTACTGTTCCTAAGACAGCTGAAAATTTTCGGGCACTCTGCACAGGTGAGAAGGGCATTGGAAAATCAACTGGAAAGCCTTTGCATTATAGAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGTACTGGTGGAGAAAGTATATATGGAGGAAAGTTCGCTGATGAAAATTTCATATTAAAGCATGACGGACCTGGTCTTCTATCTATGGCTAATGGTGGTCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTGGTTTTTGGAAAAGTTGTCGGTGGATTAGATCTTCTGAAGAAAATTGAACTGGTGGGGACACCAGATGGGAAACCTGTCCAGCCGGTTAAAATAGTTGATTGTGGTGAAACGAGTGAAGTGAAAATTCAGCCAAAAATTGGGAAAGAGAAAGGTAAGAAGAGAAAGTCTGGGGAATCCTCAACTTCTGATGATAGTTCTGACAAAAAATCAAAAGGAAAAAGGAAAACATCTTCCAAGGATTTGAGGAAGAGGAGCAGACACTCAACATCTGATTCATACAGCTCACATAGTGATAGTGACTCTGTTTCTTCAGACTCTGATTCAGATTCAGGGTCAGAATCATCGCTTTCTGATTCAAGTTCCTCTAGCTATGGTAAACATAGGAAGAGGAAACCTCTGAAAAGATCTAGGCACAAGCAGGGGAAGAAGAGAAGAAAAGGACAAAAGCAAAAGAGAAGCCGGCATAATAGACGATCAAGACGCAAGTCCCGATGGAGCTCAGAAGATTCAAGTGATACCGAAAGTGATAGTACTAGTGGTAGTGTCAGTAGTTCTGATGATGAGAGAGCTCATCGCCGTGTGTCTGGTCGTAAAACTGACAACAAACAAAAAAGAAATTTAGGAAAGCAATCTCCCAGCTCTCCTTTAGTTAGAACTGCTCCAAATCAAGGGGAAGACTCCAAGGTGAGAAGATCTGAGGACAAGCAATCACATGAAGAAGAGTCACAAGTCCTAGAAGAAGTGATGCTATGA 1167 0.4147 MSKKKNPLVFLDISIDGDPVERIVIELFASTVPKTAENFRALCTGEKGIGKSTGKPLHYRGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVGGLDLLKKIELVGTPDGKPVQPVKIVDCGETSEVKIQPKIGKEKGKKRKSGESSTSDDSSDKKSKGKRKTSSKDLRKRSRHSTSDSYSSHSDSDSVSSDSDSDSGSESSLSDSSSSSYGKHRKRKPLKRSRHKQGKKRRKGQKQKRSRHNRRSRRKSRWSSEDSSDTESDSTSGSVSSSDDERAHRRVSGRKTDNKQKRNLGKQSPSSPLVRTAPNQGEDSKVRRSEDKQSHEEESQVLEEVML 388
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4471g00032 388 CDD cyclophilin_ABH_like 7 173 - -
Pral4471g00032 388 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Pral4471g00032 388 MobiDBLite consensus disorder prediction 180 212 - -
Pral4471g00032 388 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Pral4471g00032 388 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Pral4471g00032 388 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Pral4471g00032 388 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Pral4471g00032 388 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pral4471g00032 388 MobiDBLite consensus disorder prediction 264 299 - -
Pral4471g00032 388 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Pral4471g00032 388 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Pral4471g00032 388 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Pral4471g00032 388 MobiDBLite consensus disorder prediction 232 260 - -
Pral4471g00032 388 MobiDBLite consensus disorder prediction 323 343 - -
Pral4471g00032 388 MobiDBLite consensus disorder prediction 180 388 - -
Pral4471g00032 388 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Pral4471g00032 388 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Pral4471g00032 388 Gene3D - 1 181 IPR029000 -
Pral4471g00032 388 MobiDBLite consensus disorder prediction 344 359 - -
Pral4471g00032 388 MobiDBLite consensus disorder prediction 362 388 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4471g00032 Pral-Chr4471 157949 163110 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4471g00032 25 171 U-box Gene Family AT5G67530 47.651 1.03e-33 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4471g00032 K09566 - gmx:100807327 381.333