Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4471g00031 ATGAGTAAGAAAAAGAACCCTCTTGTGTTTCTAGACATCTCGATTGATGGGGATCCTGTGGAAAGAATTGTTATTGAGCTTTTTGCCAGTACTGTTCCTAAGACAGCTGAAAATTTTCGGGCACTCTGCACAGGTGAGAAGGGCATTGGAAAATCAACTGGAAAGCCTTTGCATTATAGAGGAACTTGTTTTCATCGTATAATTAAAGGATTCATGGCCCAAGGTGGTGACTTTTCAAGGGGCAATGGTACTGGTGGAGAAAGTATATATGGAGGAAAGTTCGCTGATGAAAATTTCATATTAAAGCATGACGGACCTGGTCTTCTATCTATGGCTAATGGTGGTCCAAACACAAATGGTTCCCAATTCTTTATTACCTTCAAGCGCCAACCACATCTTGATGGGAAACATGTGGTTTTTGGAAAAGTTGTCGGTGGATTAGATCTTCTGAAGAAAATTGAACTGGTGGGGACACCAGATGGGAAACCTGTCCAGCCGGTTAAAATAGTTGATTGTGGTGAAACGAGTGAAGTGAAAATTCAGCCAAAAATTGGGAAAGAGAAAGGTAAGAAGAGAAAGTCTGGGGAATCCTCAACTTCTGATGATAGTTCTGACAAAAAATCAAAAGGAAAAAGGAAAACATCTTCCAAGGATTTGAGGAAGAGGAGCAGACACTCAACATCTGATTCATACAGCTCACATAGTGATAGTGACTCTGTTTCTTCAGACTCTGATTCAGATTCAGGGTCAGAATCATCGCTTTCTGATTCAAGTTCCTCTAGCTATGGTAAACATAGGAAGAGGAAACCTCTGAAAAGATCTAGGCACAAGCAGGGGAAGAAGAGAAGAAAAGGACAAAAGCAAAAGAGAAGCCGGCATAATAGACGATCAAGACGCAAGTCCCGATGGAGCTCAGAAGATTCAAGTGATACCGAAAGTGATAGTACTAGTGGTAGTGTCAGTAGTTCTGATGATGAGAGAGCTCATCGCCGTGTGTCTGGTCGTAAAACTGACAACAAACAAAAAAGAAATTTAGGAAAGCAATCTCCCAGCTCTCCTTTAGTTAGAACTGCTCCAAATCAAGGGGAAGACTCCAAGGTGAGAAGATCTGAGGACAAGCAATCACATGAAGAAGGTGAATTGTCTCCAGAAAATTCTGAGTTTCTGAATAATGGGCATGATACTGAAGCCAAATTCAGTAAATCTGCTAAGCAGGATGATTCTAATGACAATAGAGTCACAAGTCCTAGAAGAAGTGATGCTATGAGTCCCACTAGGAAGTTAGTTGAGCAAAACCAAGGAGGCGCTTTGTTGACCAGTCCCCGCCAACCTGCTGCCTACAAACATAGTCGGGGCTTGTCAAAAAGCCCTTCACCAAATGGTGAACCGAAGCGTATTAGAAAAGGACGAGGCTTCACTGAGCGCTATGCCTTTGCACGCAGATATCGTACTCCATCTCCAGATCGGTCATCCCATTCCTATCGTGGTGGTGATAGAAATATAAGAAGGAACTTCGACAGGCGTACAAGCTACAGAAACTACTCTGAGCGTTCACCACAGAGACGCTATGGGAGCCCTCCAATGCGCAGGAGCCGTCCAAGATATCAGAGCAGAAGAAGCCGGAGTAGAAGCATCTCTCGCAGTCCAGTGCGTGGCCGTTTTAGGGACCGTGGTCGTAGCCAGAGTCCAGTACGTAGCCCCAGTCCAGACGGCAGGCGACCTCCAATAAGTGATGGATTGAAATCCCGACTTGGCCCTCGAAGTGTTCGGCACTCCCCAGACAGAGGAAGGGCCAGGTCCAATTCCAGGGATCATCTGTTTCCCTCTAGATCCCCCGATGCCACCCCACCCAGGCGTCATGATAAAAGGACTTCTGTGTCCCCAAGCAGGTCTAGATCTAGTTCGTCATCTGGACAGAAGGGATTAGTTTCCTATGGAGAGGCCAGTCCTGATTCCGGGGCAAGGTAG 1968 0.4543 MSKKKNPLVFLDISIDGDPVERIVIELFASTVPKTAENFRALCTGEKGIGKSTGKPLHYRGTCFHRIIKGFMAQGGDFSRGNGTGGESIYGGKFADENFILKHDGPGLLSMANGGPNTNGSQFFITFKRQPHLDGKHVVFGKVVGGLDLLKKIELVGTPDGKPVQPVKIVDCGETSEVKIQPKIGKEKGKKRKSGESSTSDDSSDKKSKGKRKTSSKDLRKRSRHSTSDSYSSHSDSDSVSSDSDSDSGSESSLSDSSSSSYGKHRKRKPLKRSRHKQGKKRRKGQKQKRSRHNRRSRRKSRWSSEDSSDTESDSTSGSVSSSDDERAHRRVSGRKTDNKQKRNLGKQSPSSPLVRTAPNQGEDSKVRRSEDKQSHEEGELSPENSEFLNNGHDTEAKFSKSAKQDDSNDNRVTSPRRSDAMSPTRKLVEQNQGGALLTSPRQPAAYKHSRGLSKSPSPNGEPKRIRKGRGFTERYAFARRYRTPSPDRSSHSYRGGDRNIRRNFDRRTSYRNYSERSPQRRYGSPPMRRSRPRYQSRRSRSRSISRSPVRGRFRDRGRSQSPVRSPSPDGRRPPISDGLKSRLGPRSVRHSPDRGRARSNSRDHLFPSRSPDATPPRRHDKRTSVSPSRSRSSSSSGQKGLVSYGEASPDSGAR 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4471g00031 655 Pfam Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD 12 173 IPR002130 GO:0000413|GO:0003755
Pral4471g00031 655 CDD cyclophilin_ABH_like 7 173 - -
Pral4471g00031 655 ProSiteProfiles Cyclophilin-type peptidyl-prolyl cis-trans isomerase domain profile. 10 174 IPR002130 GO:0000413|GO:0003755
Pral4471g00031 655 MobiDBLite consensus disorder prediction 180 212 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 532 548 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 264 299 - -
Pral4471g00031 655 PANTHER PEPTIDYL-PROLYL CIS-TRANS ISOMERASE 9 174 - -
Pral4471g00031 655 ProSitePatterns Cyclophilin-type peptidyl-prolyl cis-trans isomerase signature. 59 76 IPR020892 GO:0003755|GO:0006457
Pral4471g00031 655 FunFam Peptidyl-prolyl cis-trans isomerase CYP95 1 182 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 584 606 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 232 260 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 461 515 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 397 414 - -
Pral4471g00031 655 SUPERFAMILY Cyclophilin-like 4 175 IPR029000 -
Pral4471g00031 655 Gene3D - 1 181 IPR029000 -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 323 343 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 628 643 - -
Pral4471g00031 655 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 64 76 IPR002130 GO:0000413|GO:0003755
Pral4471g00031 655 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 27 42 IPR002130 GO:0000413|GO:0003755
Pral4471g00031 655 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 107 122 IPR002130 GO:0000413|GO:0003755
Pral4471g00031 655 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 122 134 IPR002130 GO:0000413|GO:0003755
Pral4471g00031 655 PRINTS Cyclophilin peptidyl-prolyl cis-trans isomerase signature 135 150 IPR002130 GO:0000413|GO:0003755
Pral4471g00031 655 MobiDBLite consensus disorder prediction 415 439 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 180 655 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 362 383 - -
Pral4471g00031 655 MobiDBLite consensus disorder prediction 344 359 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4471g00031 Pral-Chr4471 156886 163110 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4471g00031 25 171 U-box Gene Family AT5G67530 47.651 3.73e-32 130
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4471g00031 K09566 - gmx:100791082 694.886