Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4471g00018 ATGGGGATGAATTTTGACGGTGAGCTCATGAATCTGAAGGACACAGAGCTAAGGTTGGGATTGCCCGGAAGGGATGAGGAAGATAAACGTTCATGCAGCGTCAGGAGCAACAAGAGGACTTGGCGTGAATCAAGCGAGGACGAGCAGTCATCAGTAACCCAGAACAACGCCTGTAACAGCTCTGATGATAAAGATAACGCCCCACCAGCAAAGGTACAAGTAGTGGGATGGCCACCCATTCGATCTTACAGGAAGAATTGCGTTCACCAAAAGAAGGGATCGCAGGAGGGCGATGGGGCTGGAAATATGTATGTGAAAGTGAGCATGGACGGTGCTCCTTATCTGAGGAAGATCGATCTCAAGGTTTACAACAGCTACCCACAGCTCCTCAAGGCTTTGCAGAACATGTTCAAGTGCACTTTTGGTGAATACTCAGAAAGGGAAGGCTACAACGGATCTGAATACGCTCCTACTTATGAAGACAAGGATGGCGACTGGATGCTGGTTGGAGATGTTCCATGGAATATGTTCATGTCATCTTGCAAGAGGCTTAGAATCATGAAAGGATCGGAGGCTAAGGGATTGGGTGGTAGTTTATGA 600 0.4783 MGMNFDGELMNLKDTELRLGLPGRDEEDKRSCSVRSNKRTWRESSEDEQSSVTQNNACNSSDDKDNAPPAKVQVVGWPPIRSYRKNCVHQKKGSQEGDGAGNMYVKVSMDGAPYLRKIDLKVYNSYPQLLKALQNMFKCTFGEYSEREGYNGSEYAPTYEDKDGDWMLVGDVPWNMFMSSCKRLRIMKGSEAKGLGGSL 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4471g00018 199 MobiDBLite consensus disorder prediction 18 46 - -
Pral4471g00018 199 SUPERFAMILY CAD & PB1 domains 100 188 - -
Pral4471g00018 199 FunFam Auxin-responsive protein 97 199 - -
Pral4471g00018 199 MobiDBLite consensus disorder prediction 47 63 - -
Pral4471g00018 199 Pfam AUX/IAA family 36 196 IPR033389 -
Pral4471g00018 199 MobiDBLite consensus disorder prediction 1 75 - -
Pral4471g00018 199 ProSiteProfiles PB1 domain profile. 102 189 IPR000270 GO:0005515
Pral4471g00018 199 Gene3D - 97 198 - -
Pral4471g00018 199 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 11 193 IPR003311 GO:0005634|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4471g00018 Pral-Chr4471 87587 88610 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4471g00018 105 195 B3 DNA Binding Superfamily AT2G46530 38.462 5.50e-12 62.0
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral4471g00018 AUX_IAA 1.1e-60 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4471g00018 K14484 - gmx:100780752 281.952