Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00052 ATGGAGTTCAGGTACCCAGAAGAGTCAAAGAGCTGGAGCGAAGAAATCGATGATCGATCGGAGCATAATGATGAAAGGGCAAGTGGAAGATGCTACGAGTGTGTGTTCTGCAAGAGAGGATTCACCACAGCACAGGCTCTAGGCGGACACATGAATATTCACAGGAAAGATAGAGCCAAGTCCAGCAATAAGCCCAGTTTTGCTGCTTCCACTTCATCCAAACTGCTTGACGACCATGAGACGCTCGACCATGCAATTTCAAGTTTTCCACCTCCCAGTTACTTTTCTCCTGAGGTAGATCACATCAGCAGCAATTATAATTGCCCTCCGTCCCAATTTTCTTTTCCTGCGGCACAGTACAGTGATCAAATGGATCGGGATGCGTTTGGAGGAGATTATAATTGGAGAACGGGTTTGAGTTTGTCTAATCCACCATATGTGCGTGATAATAAAGAGAAGATAGGAGGTAGCAGTGAAGAAGATGGTCTGGATTTGGAGCTTCGATTGGGTTATCATTCCTAA 522 0.454 MEFRYPEESKSWSEEIDDRSEHNDERASGRCYECVFCKRGFTTAQALGGHMNIHRKDRAKSSNKPSFAASTSSKLLDDHETLDHAISSFPPPSYFSPEVDHISSNYNCPPSQFSFPAAQYSDQMDRDAFGGDYNWRTGLSLSNPPYVRDNKEKIGGSSEEDGLDLELRLGYHS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00052 173 PANTHER OS07G0101800 PROTEIN 7 172 - -
Pral4469g00052 173 Gene3D Classic Zinc Finger 7 88 - -
Pral4469g00052 173 ProSiteProfiles Zinc finger C2H2 type domain profile. 32 59 IPR013087 -
Pral4469g00052 173 MobiDBLite consensus disorder prediction 1 27 - -
Pral4469g00052 173 ProSitePatterns Zinc finger C2H2 type domain signature. 34 54 IPR013087 -
Pral4469g00052 173 SUPERFAMILY beta-beta-alpha zinc fingers 29 58 IPR036236 -
Pral4469g00052 173 MobiDBLite consensus disorder prediction 54 74 - -
Pral4469g00052 173 MobiDBLite consensus disorder prediction 141 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00052 Pral-Chr4469 392486 393586 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00052 32 95 C2H2 Transcription Factor Family AT5G43540 45.205 1.43e-14 65.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral4469g00052 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00052 - - pcin:129296398 149.058