Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00042 ATGGCTTGTTCCGGAAGTAATAGTGGAAATGGGAGTGGAGGTTCAGGGTCTCCTTGTGGGGCATGCAAGTTTCTGAGAAGAAAGTGCGCGGCTGATTGTATATTTGCTCCTTATTTCTGCTCCGACCAAGGCCCTGCTAGTTTTGCTGCCATACATAAGGTGTTTGGAGCTAGTAATGTCTCCAAACTCCTCTTGAACTTGCCCCATGATCGTTGTGAGGCTGTCCTCACTATTGCTTATGAAGCTCAGGCTCGTATCAGAGACCCTGTTTATGGTTGTGTCTCCCACATTTTTGCCTTACAACAACAGGTGGCATGCTTGCAAGCACAGCTGATGCAAGCCAAGGCACAGTTGGCTCAGAAGAGCACAGAGAATAATGAAGACTACTGGGGAAGGAACAATGCTTATGGACAAACACTGAATCCAGTCTATGGCACTAGTTACAGCAACATGAACCCTATATCTCCTCAGAGTTCTCTTGACTCCGTTGATTACTCTACAATTCACGATGGATCCATGTGTTTGCAGCAAGAAGGTTTCTCTTTCCAGCAACCTCGCTCCAAGAAAAGTCCATCGTATGATAGCAACGACTTGAGCGAGCTTCAAGAGCTAGCACTCAGAATGATGAGAAACTAG 636 0.4638 MACSGSNSGNGSGGSGSPCGACKFLRRKCAADCIFAPYFCSDQGPASFAAIHKVFGASNVSKLLLNLPXHDRCEAVLTIAYEAQARIRDPVYGCVSHIFALQQQVACLQAQLMQAKAQLAQKSTENNEDYWGRNNAYGQTLNPVYGTSYSNMNPISPQSSLDSVDYSTIHDGSMCLQQEGFSFQQPRSKKSPSYDSNDLSELQELALRMMRN 212
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00042 212 ProSiteProfiles LOB domain profile. 17 119 IPR004883 -
Pral4469g00042 212 Coils Coil 98 125 - -
Pral4469g00042 212 PANTHER LOB DOMAIN CONTAINING PROTEIN 14 156 - -
Pral4469g00042 212 Pfam Lateral organ boundaries (LOB) domain 18 116 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00042 Pral-Chr4469 360253 361758 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00042 6 212 AS2 family AT2G42430 55.918 1.52e-80 239
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4469g00042 LOB 1.9e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00042 K13944 - gmx:100801508 255.373