Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00041 ATGACTGGTTCTGGTTCTCCCTGTGGAGCCTGCAAATTCTTGAGAAGGAAATGTGTGAGAGGCTGTGTTTTTGCCCCTTACTTTTGCCATGAACAAGGCGCTACTCATTTTTCAGCCATTCATAAGGTTTTTGGTGCAAGCAACGTCTCTAAGCTTCTCTCTCACCTCCCTGTAAGCGACCGTTGTGAAGCTGCAGTGACCATCTCTTATGAAGCTCAAGCCAGACTTCAGGATCCTATTTATGGCTGTGTTTCCCATATCTTCACCCTCCAACAACAGGTGGTTAATTTACAAGCACAGCTAGCTTATCTGAGGGAACAGGCAGCTCAGAGCAATATTCTGAATGCTTCTGTCACTGAAAACCCTAATAAACCTGCTGCTTTCTCTGATCATGATCTTCAAAAGTGGTTCCAGCCGGAGAATTCCAACACAGGGACCCAATTTCTTCCCAGCTCGTCTGATATTAATTCTTTTGCAACACAGTGCTACGGAAACTACACAACTCCCTTCGTGAATCCAAACCCTATTGGGGATTATAAAAGCTCAGGAACCATGGAAGACAGTGGTTCATTGTCGAGCTTTCATGGGGAGACCAATTGTAACTCCGTGTCCTTCGACATGCAAACAAGCAATAGGCAGTGGGACTTTCACGAAGTGGATGACCTTCAATCAGTGGCTTTTGGTTACAGTGATGACCACAGATCAGCTTCATGA 714 0.4538 MTGSGSPCGACKFLRRKCVRGCVFAPYFCHEQGATHFSAIHKVFGASNVSKLLSHLPVSDRCEAAVTISYEAQARLQDPIYGCVSHIFTLQQQVVNLQAQLAYLREQAAQSNILNASVTENPNKPAAFSDHDLQKWFQPENSNTGTQFLPSSSDINSFATQCYGNYTTPFVNPNPIGDYKSSGTMEDSGSLSSFHGETNCNSVSFDMQTSNRQWDFHEVDDLQSVAFGYSDDHRSAS 237
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00041 237 Coils Coil 87 107 - -
Pral4469g00041 237 ProSiteProfiles LOB domain profile. 6 108 IPR004883 -
Pral4469g00041 237 PANTHER LOB DOMAIN CONTAINING PROTEIN 1 174 - -
Pral4469g00041 237 Pfam Lateral organ boundaries (LOB) domain 7 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00041 Pral-Chr4469 349530 350477 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00041 7 229 AS2 family AT3G58190 53.275 6.27e-71 214
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Pral4469g00041 LOB 5.5e-36 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00041 K13945 - gmx:100776678 312.768