Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00035 ATGTCTCACAGGGAGACTGCTTTCTATGTGATCTGTAGAAAATACAGGCCTCACCTTCTCATGGTTTTTGTTCAGGTGGCTGTCACACTTCTCTATCAGAAGATAGAGGCTTCCTTCAGCAAGGGAATGAATCTTCATGTTTTTGTAACTTACCGGCATGCTCTTGGTGGTATTGTAGTGCTTCCTTTTGCCTATTTTCTTGAAAGAAAATCTAGGCCGAAGATGACGGTGGCAATGTTCATGGAGCTATTTTTGCTTTCCCTTTTAGGGGTTAGCCTCACCCTAAACATGTATTTCGCAAGCTTGAAGTATACCTCTCCTTCCTTTGTCACTTCAATGGTTAATACAATATCAGCTCTAACATTTATAATTGCAGTTGCACTCAGGTTAGAGGCTGTTGATGTTAAGAACCCTCGTGGGGTAGCTAAGATCTTTGGAACCCTTCTATCATTGGCTGGGGCCTTGACTATGACTTTATATAAAGGGCACGCCATACCGAACTTAAAAGCTGCTCCAGTCCTAATCACAGCCCAATCTGCTCATCCTAACTGGATTAAGGGATCTATTTTGACTGTTGCAAGTTGCATATCATGGTCTGTCTTCTACATAATGCAGGCATTTACAGTGAAGAAATATCCAGCACAGCTTTCGCTCACGGCATGGATAAATTGTATCGGTGCAGTACAATCAGCAGTCTTTGCTGTGATCGTTGAACACAAGCTCCATGCCTGGTTCATTACGTCCAGAATCGAACTCTATTGCATCTTATATGCTGGAATTATAAGTTGTGGCTTGAGTATTTTCGTTCAGTTATGGGCTACGGACCAAAAGGGACCTGTCTTCGTGACTATGTTCAATCTCCTTGGGACAGTCTTAGTGTCAGTCCTGGCGTACTTAGTTATGGGGGAACAGCTTCACATGGGCAGTATACTGGGAGGAGTCATCGTCATCATCGGCCTTTACTTGCTTTTATGGGGAAAAGAAACTGATCAAGATTACAAATCACGACAACTATCAAGTTCAGCACATGAGCAAAACGAAAGCAGGACGCAGATAGCGACTTCAGGGCAGACAGAAAAGTTAAGCTCTGAACAAGGTAGCGTCGCGAAAGATGGGATCTTATGA 1125 0.4329 MSHRETAFYVICRKYRPHLLMVFVQVAVTLLYQKIEASFSKGMNLHVFVTYRHALGGIVVLPFAYFLERKSRPKMTVAMFMELFLLSLLGVSLTLNMYFASLKYTSPSFVTSMVNTISALTFIIAVALRLEAVDVKNPRGVAKIFGTLLSLAGALTMTLYKGHAIPNLKAAPVLITAQSAHPNWIKGSILTVASCISWSVFYIMQAFTVKKYPAQLSLTAWINCIGAVQSAVFAVIVEHKLHAWFITSRIELYCILYAGIISCGLSIFVQLWATDQKGPVFVTMFNLLGTVLVSVLAYLVMGEQLHMGSILGGVIVIIGLYLLLWGKETDQDYKSRQLSSSAHEQNESRTQIATSGQTEKLSSEQGSVAKDGIL 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00035 374 Pfam EamA-like transporter family 36 157 IPR000620 GO:0016020
Pral4469g00035 374 Pfam EamA-like transporter family 186 324 IPR000620 GO:0016020
Pral4469g00035 374 MobiDBLite consensus disorder prediction 337 365 - -
Pral4469g00035 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 232 327 - -
Pral4469g00035 374 PANTHER WAT1-RELATED PROTEIN 17 337 IPR030184 GO:0016020|GO:0022857
Pral4469g00035 374 MobiDBLite consensus disorder prediction 337 374 - -
Pral4469g00035 374 SUPERFAMILY Multidrug resistance efflux transporter EmrE 51 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00035 Pral-Chr4469 315345 317471 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00035 42 364 Nodulin-like Gene Family AT3G18200 39.024 8.19e-78 243
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00035 - - gmx:100808275 464.536