Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4469g00029 | ATGAATTGGCTGGTCAATATAAATGCCAGGGTCAAGCCGGTGTCGATGAGCGCGCCAAACAGGATGGAACAGTTGCAGAAAAAAACTGGCAAGGAAGACGAAGCAAAAGAAAGCAAGTACAGAGGAGTACGAAGGCGGCCGTGGGGGAAGTTCGCGGCAGAGATTCGAGATTCGAACAGGCACGGAGCTCGATTGTGGCTGGGCACTTTCAACACGGCAGAAGAAGCGGCAAGAGCCTATGATCGTGCTGCTTTCGGGATGAGAGGGCCTTCGGCCATTCTCAACTTCCCAGAAGAATACGGTTTGAGCAGTGCAGGGAGTGCCTGTTCTAGTAGTGGCCACCTGCATCGCTCTTCATCGTCGTCTGCTTCGTCGTCGTCTTCAATGGCGGAAGCTCAGGGTGGAAGACAGGTGTTCGAATTCGAGTGTTTGGATGATAAATTGCTAGAGGACCTTCTTGACTATTCGACCAAGAACGAAGAGTAA | 486 | 0.5165 | MNWLVNINARVKPVSMSAPNRMEQLQKKTGKEDEAKESKYRGVRRRPWGKFAAEIRDSNRHGARLWLGTFNTAEEAARAYDRAAFGMRGPSAILNFPEEYGLSSAGSACSSSGHLHRSSSSSASSSSSMAEAQGGRQVFEFECLDDKLLEDLLDYSTKNEE | 161 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4469g00029 | 161 | MobiDBLite | consensus disorder prediction | 102 | 131 | - | - | |
Pral4469g00029 | 161 | MobiDBLite | consensus disorder prediction | 25 | 41 | - | - | |
Pral4469g00029 | 161 | PANTHER | DNA-BINDING DOMAIN | 26 | 154 | IPR044808 | GO:0003700|GO:0009873 | |
Pral4469g00029 | 161 | Pfam | AP2 domain | 38 | 89 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4469g00029 | 161 | MobiDBLite | consensus disorder prediction | 16 | 41 | - | - | |
Pral4469g00029 | 161 | FunFam | Ethylene-responsive transcription factor 2 | 38 | 98 | - | - | |
Pral4469g00029 | 161 | ProSiteProfiles | AP2/ERF domain profile. | 39 | 97 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4469g00029 | 161 | PRINTS | Ethylene responsive element binding protein signature | 63 | 79 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4469g00029 | 161 | PRINTS | Ethylene responsive element binding protein signature | 40 | 51 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4469g00029 | 161 | Gene3D | AP2/ERF domain | 38 | 98 | IPR036955 | GO:0003700|GO:0006355 | |
Pral4469g00029 | 161 | SUPERFAMILY | DNA-binding domain | 38 | 98 | IPR016177 | GO:0003677 | |
Pral4469g00029 | 161 | SMART | rav1_2 | 39 | 103 | IPR001471 | GO:0003700|GO:0006355 | |
Pral4469g00029 | 161 | MobiDBLite | consensus disorder prediction | 104 | 131 | - | - | |
Pral4469g00029 | 161 | CDD | AP2 | 38 | 98 | IPR001471 | GO:0003700|GO:0006355 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4469g00029 | Pral-Chr4469 | 283145 | 283862 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4469g00029 | 36 | 154 | AP2-EREBP Transcription Factor Family | AT3G23230 | 63.025 | 5.76e-42 | 135 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | AP2 or ERF-ERF | Pral4469g00029 | AP2 | 2.4e-16 | CL0081 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4469g00029 | - | - | qsu:111996183 | 139.813 |