Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00029 ATGAATTGGCTGGTCAATATAAATGCCAGGGTCAAGCCGGTGTCGATGAGCGCGCCAAACAGGATGGAACAGTTGCAGAAAAAAACTGGCAAGGAAGACGAAGCAAAAGAAAGCAAGTACAGAGGAGTACGAAGGCGGCCGTGGGGGAAGTTCGCGGCAGAGATTCGAGATTCGAACAGGCACGGAGCTCGATTGTGGCTGGGCACTTTCAACACGGCAGAAGAAGCGGCAAGAGCCTATGATCGTGCTGCTTTCGGGATGAGAGGGCCTTCGGCCATTCTCAACTTCCCAGAAGAATACGGTTTGAGCAGTGCAGGGAGTGCCTGTTCTAGTAGTGGCCACCTGCATCGCTCTTCATCGTCGTCTGCTTCGTCGTCGTCTTCAATGGCGGAAGCTCAGGGTGGAAGACAGGTGTTCGAATTCGAGTGTTTGGATGATAAATTGCTAGAGGACCTTCTTGACTATTCGACCAAGAACGAAGAGTAA 486 0.5165 MNWLVNINARVKPVSMSAPNRMEQLQKKTGKEDEAKESKYRGVRRRPWGKFAAEIRDSNRHGARLWLGTFNTAEEAARAYDRAAFGMRGPSAILNFPEEYGLSSAGSACSSSGHLHRSSSSSASSSSSMAEAQGGRQVFEFECLDDKLLEDLLDYSTKNEE 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00029 161 MobiDBLite consensus disorder prediction 102 131 - -
Pral4469g00029 161 MobiDBLite consensus disorder prediction 25 41 - -
Pral4469g00029 161 PANTHER DNA-BINDING DOMAIN 26 154 IPR044808 GO:0003700|GO:0009873
Pral4469g00029 161 Pfam AP2 domain 38 89 IPR001471 GO:0003700|GO:0006355
Pral4469g00029 161 MobiDBLite consensus disorder prediction 16 41 - -
Pral4469g00029 161 FunFam Ethylene-responsive transcription factor 2 38 98 - -
Pral4469g00029 161 ProSiteProfiles AP2/ERF domain profile. 39 97 IPR001471 GO:0003700|GO:0006355
Pral4469g00029 161 PRINTS Ethylene responsive element binding protein signature 63 79 IPR001471 GO:0003700|GO:0006355
Pral4469g00029 161 PRINTS Ethylene responsive element binding protein signature 40 51 IPR001471 GO:0003700|GO:0006355
Pral4469g00029 161 Gene3D AP2/ERF domain 38 98 IPR036955 GO:0003700|GO:0006355
Pral4469g00029 161 SUPERFAMILY DNA-binding domain 38 98 IPR016177 GO:0003677
Pral4469g00029 161 SMART rav1_2 39 103 IPR001471 GO:0003700|GO:0006355
Pral4469g00029 161 MobiDBLite consensus disorder prediction 104 131 - -
Pral4469g00029 161 CDD AP2 38 98 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00029 Pral-Chr4469 283145 283862 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00029 36 154 AP2-EREBP Transcription Factor Family AT3G23230 63.025 5.76e-42 135
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2 or ERF-ERF Pral4469g00029 AP2 2.4e-16 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00029 - - qsu:111996183 139.813