Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00028 ATGACTGCAACACTGTCTTCGCCGTCAGCGCGGCACCCCTGCCCAGATTGGGAGTCCTGGCAGGAGCCCTCTGATGCGCTTTTGATTTCTCTGCCAAGCGACCAACTTCATCACGAAGACCCCTTCCATGATTACCTCTGCTTCGATATGGTTGACAGGGAGGCGAATCAAGCGCCGGTGAGTTCAGAAGCCATCGAAACAAAGAAGACTGTTAAGGGAAGATCGTACATCGGGGTGAGGAAGAGACCTTGGGGGAAATTTGCGGCAGAGATCAGAGATACCACCAGGAATGGGATCAGAGTTTGGCTGGGAACGTTCGAGACTGCCGAGGAGGCTGCTTTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAATAACGCTGTTCTCAATTTTCCTGTGGAAAAGGTGAAGGAGTCTCTGCAACACATCAAGTATGGCTGCCGCAAAGGGCATTCGCCTGCTTTGGCCCTCAAAGAGAGGCACTACATCCAAAGAAAACAGTCGTCAAAGGCTAGGAAAGGCAAAGCCAAACAGCAATCAGAGGTGGTGGTGCTGGAGGACTTGGGTGTAGAATATCTGGAGCAACTTCTCAGCATATCTGATCAAACCACAAGCTAG 621 0.5121 MTATLSSPSARHPCPDWESWQEPSDALLISLPSDQLHHEDPFHDYLCFDMVDREANQAPVSSEAIETKKTVKGRSYIGVRKRPWGKFAAEIRDTTRNGIRVWLGTFETAEEAALAYDQAAFTMRGNNAVLNFPVEKVKESLQHIKYGCRKGHSPALALKERHYIQRKQSSKARKGKAKQQSEVVVLEDLGVEYLEQLLSISDQTTS 206
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00028 206 PRINTS Ethylene responsive element binding protein signature 76 87 IPR001471 GO:0003700|GO:0006355
Pral4469g00028 206 PRINTS Ethylene responsive element binding protein signature 99 115 IPR001471 GO:0003700|GO:0006355
Pral4469g00028 206 PANTHER DNA-BINDING DOMAIN 57 199 IPR044808 GO:0003700|GO:0009873
Pral4469g00028 206 FunFam Ethylene-responsive transcription factor 2 74 135 - -
Pral4469g00028 206 SUPERFAMILY DNA-binding domain 76 135 IPR016177 GO:0003677
Pral4469g00028 206 CDD AP2 76 134 IPR001471 GO:0003700|GO:0006355
Pral4469g00028 206 Gene3D AP2/ERF domain 75 135 IPR036955 GO:0003700|GO:0006355
Pral4469g00028 206 ProSiteProfiles AP2/ERF domain profile. 75 133 IPR001471 GO:0003700|GO:0006355
Pral4469g00028 206 Pfam AP2 domain 76 125 IPR001471 GO:0003700|GO:0006355
Pral4469g00028 206 SMART rav1_2 75 139 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00028 Pral-Chr4469 273179 274710 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00028 51 204 AP2-EREBP Transcription Factor Family AT3G23240 54.088 1.12e-54 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4469g00028 AP2 3e-14 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00028 K14516 - gmx:100527364 238.424