Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00027 ATGTCTTGGAGCCCAGATTGTGAGTTTTGGGAGGAGACTACCTTTGAACCTTTCGTGGCCTCTTCTTCATCAAGCGACCAATTTCACGAAGACCCTTTCCAAGATTATCTCTGCTTCGATATGATTGAGAAGGAGGTAAATCAAGCACCGGTGAGTTGTAAAAACAAAGAAACCGAGAGCGCAGTGAAGGAAAGATCATACATAGGGGTGAGGAAGAGACCTTGGGGGAAATTTGCAGCTGAGATCAGAGACACGACCAGGAATGGAACCAGAGTTTGGCTGGGAACGTTCGAGACTGCCGAGGAGGCTGCTCTAGCTTATGACCAAGCTGCATTCACCATGAGAGGCAACAACGCCGTTCTTAATTTCCCTGTGGAAAAGGTGAAGGAGTCTCTGCAACACATCAAGTATGGCTGCCGCAAAGGCTGTTCGCCTGCTTTGGCCCTCAAAGAGAGGTTCTACATCCAAAGAAAATTGTCGTCAAAGGCAAAGAAAGACAAAGCTAAACAACAATCGGAGGTGTTGGTGCTGGAGGACTTGGGTGTTGAATATCTGGAGCAACTTCTCACCATATCTGATCAAACTACAAGCTAG 594 0.4714 MSWSPDCEFWEETTFEPFVASSSSSDQFHEDPFQDYLCFDMIEKEVNQAPVSCKNKETESAVKERSYIGVRKRPWGKFAAEIRDTTRNGTRVWLGTFETAEEAALAYDQAAFTMRGNNAVLNFPVEKVKESLQHIKYGCRKGCSPALALKERFYIQRKLSSKAKKDKAKQQSEVLVLEDLGVEYLEQLLTISDQTTS 197
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00027 197 PRINTS Ethylene responsive element binding protein signature 67 78 IPR001471 GO:0003700|GO:0006355
Pral4469g00027 197 PRINTS Ethylene responsive element binding protein signature 90 106 IPR001471 GO:0003700|GO:0006355
Pral4469g00027 197 Pfam AP2 domain 67 116 IPR001471 GO:0003700|GO:0006355
Pral4469g00027 197 SUPERFAMILY DNA-binding domain 67 126 IPR016177 GO:0003677
Pral4469g00027 197 ProSiteProfiles AP2/ERF domain profile. 66 124 IPR001471 GO:0003700|GO:0006355
Pral4469g00027 197 PANTHER DNA-BINDING DOMAIN 35 190 IPR044808 GO:0003700|GO:0009873
Pral4469g00027 197 Gene3D AP2/ERF domain 66 126 IPR036955 GO:0003700|GO:0006355
Pral4469g00027 197 FunFam Ethylene-responsive transcription factor 2 65 126 - -
Pral4469g00027 197 CDD AP2 67 125 IPR001471 GO:0003700|GO:0006355
Pral4469g00027 197 SMART rav1_2 66 130 IPR001471 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00027 Pral-Chr4469 245910 247448 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00027 28 195 AP2-EREBP Transcription Factor Family AT3G23240 49.438 2.33e-57 178
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF AP2/ERF-ERF Pral4469g00027 AP2 3.6e-15 CL0081
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00027 K14516 - gmx:100527364 210.69