Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00006 ATGGGTCTTAGAGACATTGGTGCTTCGTTGCCTCCTGGTTTTCGGTTTTATCCCAGTGATGAAGAATTGGTGTGCCATTATCTCTCCAAAAAGATCTCAAACGAGGAAGCTCTCAAGGGTACTTTGGTCGAAATCGACCTGCATACATGCGAGCCATGGCAGCTTCCTGAGGTGGCTAAGCTCAACGCGAACGAGTGGTACTTCTTCAGCTTCCGGGACCGCAAATATGCGACGGGGTTTCGGACCAATAGGGCGACGACATCTGGATATTGGAAAGCCACGGGCAAGGATCGAACGGTGGTGGATCCGATGACGAGAGAGGTTGTAGGGATGAGGAAGACGTTGGTGTTCTACAGGAACAGAGCTCCCAATGGTATCAAAACGGGTTGGATCATGCATGAGTTCCGCTTGGAGACCCCACAAATGCCCCCTAAGGAAGACTGGGTTTTGTGTAGAGTATTCCACAAAACCAAATCAGATGACAACACCAACAACAGCAATATCAGTGCCGAACTCATGTGGGATTCCATTTCATCTCCTTCTCTAACTTTGGCTTCTTCGTCTTCTCCAAACAGCCACACCTTCCCTCTCCTCGCCTACAACCAACTTTCCTCTTCTTCTACTTCCTCCATCCCCACCTTCATTAATAACACCCAACCCAACCAGCATTCTAATTCTCTCCTCAACTTTCTCCATTTTTCTCGGGAAACAAACACCGCCGCCACCAGCACCGCTACTCAGGACCAGGTTAGCCCCCGAGGCGGCGGCGGCGATGATGGCTATGGCGGCTTCTTCTGGGACATGTGCCTCGAAGATAACAGTGGTTTTCAGAATGGCGTCGATGCTATGAGATCCTTCGAGGTTGATAATAATAGCATGGTCTTGTTGTGA 891 0.4983 MGLRDIGASLPPGFRFYPSDEELVCHYLSKKISNEEALKGTLVEIDLHTCEPWQLPEVAKLNANEWYFFSFRDRKYATGFRTNRATTSGYWKATGKDRTVVDPMTREVVGMRKTLVFYRNRAPNGIKTGWIMHEFRLETPQMPPKEDWVLCRVFHKTKSDDNTNNSNISAELMWDSISSPSLTLASSSSPNSHTFPLLAYNQLSSSSTSSIPTFINNTQPNQHSNSLLNFLHFSRETNTAATSTATQDQVSPRGGGGDDGYGGFFWDMCLEDNSGFQNGVDAMRSFEVDNNSMVLL 296
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00006 296 SUPERFAMILY NAC domain 8 156 IPR036093 GO:0003677|GO:0006355
Pral4469g00006 296 ProSiteProfiles NAC domain profile. 10 156 IPR003441 GO:0003677|GO:0006355
Pral4469g00006 296 Gene3D NAC domain 19 161 IPR036093 GO:0003677|GO:0006355
Pral4469g00006 296 PANTHER PROTEIN CUP-SHAPED COTYLEDON 2-RELATED 9 219 - -
Pral4469g00006 296 Pfam No apical meristem (NAM) protein 11 137 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00006 Pral-Chr4469 88032 91689 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00006 6 228 NAC Transcription Factor Family AT1G56010 47.083 3.58e-64 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NAC Pral4469g00006 NAM 1.5e-37 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4469g00006 - - gmx:100783645 404.445