Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4469g00001 ATGGATTCTGCCAGAGGTTGGTTTCAGAAGTTTCATCCAAGGGATAAAATGAGGTCGTCTTCGAAGAAGAAGGAGGGTTCTGGAGGAGGAATCGAAGTTTCAGATGCACAACTAGATGAAGAAGCTCTTTCTAATATAACGAAACAAAAGGTTGCTGCGGCAAAGCAGTACATAGAGAATCATTATAAGGAGCAAATGAAGAGCCTTCAGGATAGAAAGGAGCGTCGAACTATCTTGGAAAAGAAGTTGGCTGATGCTGATGTCTCTGAGGAAGACCAAAACAACCTTTTCAAGTTTCTGGAGAAAAAGGAAACTGAATACATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACCATGATTGGAAAAGGGCATTTGGAGAGATTTGTGCAGGTCAGAGTTTGCAGGGAAAAGACAACAGGCCATGTATTTGCAATGAAAAAACTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGATAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAAGATGATGACTACCTATACCTGATAATGGAGTATCTGCCGGGTGGGGACATGATGACTTTACTCATGAGAAAGGATATCTTGACTGAGGATGAAACTAGATTTTACGTAGGCGAAACAGTTTTGGCTATTGAGTCTATACATAAACACAATTATATCCATAGGGATATTAAGCCTGATAATTTGTTATTGGATAGATATGGACACTTAAGGCTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAGCATACTTCAAGAGGAGGACTTGGCGGAAGGTCAGTATGTGAATGGTTCTACACAGAATGAGGAACATGGATCTTCAAATCGCACACAACAAGAACAATTACAACACTGGCAAAAGAACAGGAGGACACTAGCTTATTCTACTGTTGGTACGCCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAAGGCTATGGTATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTACGAAATGTTAGTAGGATATCCTCCTTTTTATTCTGATGATCCAATGACAACGTGCAGAAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAAGAAGCAATGCTATCTCCTGAAGCTAAAGATTTGATCAGTAAACTATTGTGTAATGTGAATCAGAGGCTGGGATCAAAAGGTGCAGGTGAAATAAAGGCTCATCCATTTTTCAAAGGTATTGAATGGGATAAGCTATACCAAATGGAAGCTGCATTTATTCCTGAGGTTAACGATGACTTAGACACTCAAAATTTTGAGAAGTTTGATGAGTCCGACAGCTGCAGTCAACCATCCTCTAGAAGTGGTCCATGGAGGAAGATGCTTTCATCTAAAGACGTAAATTTTGTTGGATACACGTATAAGAACTTTGAAATTGTCAACGACTATCAAGTTCCCGGAATGGCTGAATTGAAAAAGAAAACCTCCAAAGCTAAGAGGCCATCCGTCAAGTCACTTTTTGATGGCGAGACAGCTGAAACATCAGAAGCCTCCGAGGCTTCTGCGAGCATTGACTCTGCTTAA 1614 0.4033 MDSARGWFQKFHPRDKMRSSSKKKEGSGGGIEVSDAQLDEEALSNITKQKVAAAKQYIENHYKEQMKSLQDRKERRTILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGHLERFVQVRVCREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSILQEEDLAEGQYVNGSTQNEEHGSSNRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTHLKFPEEAMLSPEAKDLISKLLCNVNQRLGSKGAGEIKAHPFFKGIEWDKLYQMEAAFIPEVNDDLDTQNFEKFDESDSCSQPSSRSGPWRKMLSSKDVNFVGYTYKNFEIVNDYQVPGMAELKKKTSKAKRPSVKSLFDGETAETSEASEASASIDSA 537
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4469g00001 537 MobiDBLite consensus disorder prediction 7 29 - -
Pral4469g00001 537 Gene3D Transferase(Phosphotransferase) domain 1 207 439 - -
Pral4469g00001 537 Pfam Protein kinase domain 121 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4469g00001 537 Gene3D Phosphorylase Kinase; domain 1 118 450 - -
Pral4469g00001 537 FunFam Non-specific serine/threonine protein kinase 320 439 - -
Pral4469g00001 537 SUPERFAMILY Protein kinase-like (PK-like) 93 475 IPR011009 -
Pral4469g00001 537 MobiDBLite consensus disorder prediction 1 36 - -
Pral4469g00001 537 CDD MobB_NDR_LATS-like 54 115 - -
Pral4469g00001 537 FunFam Non-specific serine/threonine protein kinase 91 206 - -
Pral4469g00001 537 Pfam Protein kinase C terminal domain 440 484 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pral4469g00001 537 SMART pkinase_C_6 422 486 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral4469g00001 537 MobiDBLite consensus disorder prediction 518 537 - -
Pral4469g00001 537 ProSitePatterns Serine/Threonine protein kinases active-site signature. 242 254 IPR008271 GO:0004672|GO:0006468
Pral4469g00001 537 ProSiteProfiles AGC-kinase C-terminal domain profile. 422 494 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral4469g00001 537 SMART serkin_6 120 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4469g00001 537 ProSiteProfiles Protein kinase domain profile. 120 421 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4469g00001 537 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 470 - -
Pral4469g00001 537 CDD STKc_NDR_like 118 485 - -
Pral4469g00001 537 MobiDBLite consensus disorder prediction 504 537 - -
Pral4469g00001 537 FunFam Non-specific serine/threonine protein kinase 207 274 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4469g00001 Pral-Chr4469 8783 16558 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4469g00001 1 517 AGC Kinase Gene Family AT2G20470 78.137 0.0 842
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pral4469g00001 Pkinase 1.7e-59 CL0016