Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4468g00011 ATGGATTCTGCCAGAGGTTGGTTTCAGAAGTTTCATCCAAGGGATAAAATGAGGTCTTCTTCGAAGAAGAAGGAGGGTTCTGGAGGAGGAATCGAAGTTTCAGATGCACAACTAGATGAAGAAGCTCTTTCTAATATAACGAAACAAAAGGTTGCTGCGGCAAAGCAGTACATAGAGAATCATTATAAGGAGCAAATGAAGAGCCTTCAGGATAGAAAGGAGCGAGTTACCTGTTTGCAGTGTAATGAACGCAAACTATTGAAACTTAGCTCCATTGTAAAGATGGGAGCTCTATGGAAAAGGACATACTTCTCTTTCTTTCGAACTATCTTGGAAAAGAAGTTGGCCGATGCTGATGTCTCTGAGGAAGACCAAAACAACCTTTTCAAGTTTCTGGAGAAAAAGGAAACTGAATACATGCGGCTTCAGAGGCATAAGATGGGTGTTGATGATTTTGAATTGTTGACCATGATTGGAAAAGGTGCATTTGGAGAGGTCAGAGTTTGCAGGGAAAAGACAACAGGCCATGTATTTGCAATGAAAAAACTAAAGAAATCAGAGATGCTTCGCAGAGGCCAGGTAGAACATGTCAGAGCTGAAAGGAACCTCCTTGCAGAGGTTGATAGCAATTGCATAGTCAAACTTTACTGTTCTTTCCAAGATGATGACTACCTATACCTGATAATGGAGTATCTGCCGGGTGGGGACATGATGACTTTACTTATGAGAAAGGATATCTTGACTGAGGATGAAACAAGATTTTACGTAGGCGAAACAGTTTTGGCTATTGAGTCTATACATAAACACAATTATATCCATAGGGATATTAAGCCTGATAATTTGTTATTGGATAGATATGGACACTTAAGGCTGTCAGATTTTGGACTTTGTAAACCATTAGATTGCAGCATACTTCAAGAGGAGGACTTGGCCGAAGGTCAGTATGTGAATGGTTCTGCACAGAATGAGGAACATGGATCTTCAAATCGCACACAACAAGAACAATTACAACACTGGCAAAAGAACAGGAGGACACTAGCTTATTCTACTGTTGGTACGCCAGATTATATTGCTCCAGAAGTTCTATTGAAGAAGGGTTATGGTATGGAATGTGATTGGTGGTCTCTTGGAGCTATTATGTACGAAATGTTAGTAGGATATCCTCCTTTTTATTCTGATGATCCAATGACAACGTGCAGAAAGATAGTAAACTGGAAAACTCACTTGAAATTTCCTGAAGAGGCAATGCTTTCTCCTGAAGCTAAAGATTTGATCAGTAAACTATTGTGTAATGTGAATCAGAGGCTGGGATCAAAAGGTGCAGGTGAAATAAAGGCTCATCCATTTTTCAAAGGTATTGAATGGGATAAGCTATACCAAATGGAAGCTGCATTTATTCCTGAGGTTAACGATGACTTAGATACTCAAAATTTTGAGAAGTTTGATGAGTCCGACAGCTGCAGTCAACCATCCTCTAGAAGTGGTCCATGGAGGAAGATGCTTTCATCTAAAGACGTAAATTTTGTTGGATACACGTATAAGAACTTTGAAATTGTCAACGACTATCAAGTTCCCGGAATGGCTGAATTGAAAAAGAAAACCTCCAAAGCTAAGAGGCCATCCGTCAAGTCACTTTTTGATGGCGAGATAGCTGAAACATCAGAAGCCTCCGAGGCTTCTGCGAGCAATGACTCTGCTTAA 1701 0.4009 MDSARGWFQKFHPRDKMRSSSKKKEGSGGGIEVSDAQLDEEALSNITKQKVAAAKQYIENHYKEQMKSLQDRKERVTCLQCNERKLLKLSSIVKMGALWKRTYFSFFRTILEKKLADADVSEEDQNNLFKFLEKKETEYMRLQRHKMGVDDFELLTMIGKGAFGEVRVCREKTTGHVFAMKKLKKSEMLRRGQVEHVRAERNLLAEVDSNCIVKLYCSFQDDDYLYLIMEYLPGGDMMTLLMRKDILTEDETRFYVGETVLAIESIHKHNYIHRDIKPDNLLLDRYGHLRLSDFGLCKPLDCSILQEEDLAEGQYVNGSAQNEEHGSSNRTQQEQLQHWQKNRRTLAYSTVGTPDYIAPEVLLKKGYGMECDWWSLGAIMYEMLVGYPPFYSDDPMTTCRKIVNWKTHLKFPEEAMLSPEAKDLISKLLCNVNQRLGSKGAGEIKAHPFFKGIEWDKLYQMEAAFIPEVNDDLDTQNFEKFDESDSCSQPSSRSGPWRKMLSSKDVNFVGYTYKNFEIVNDYQVPGMAELKKKTSKAKRPSVKSLFDGEIAETSEASEASASNDSA 566
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4468g00011 566 Gene3D Phosphorylase Kinase; domain 1 150 479 - -
Pral4468g00011 566 SMART pkinase_C_6 451 515 IPR000961 GO:0004674|GO:0005524|GO:0006468
Pral4468g00011 566 MobiDBLite consensus disorder prediction 7 29 - -
Pral4468g00011 566 CDD STKc_NDR_like 150 514 - -
Pral4468g00011 566 ProSitePatterns Protein kinases ATP-binding region signature. 158 181 IPR017441 GO:0005524
Pral4468g00011 566 SMART serkin_6 152 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4468g00011 566 Pfam Protein kinase domain 153 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4468g00011 566 FunFam Non-specific serine/threonine protein kinase 123 235 - -
Pral4468g00011 566 MobiDBLite consensus disorder prediction 1 36 - -
Pral4468g00011 566 Pfam Protein kinase C terminal domain 469 513 IPR017892 GO:0004674|GO:0005524|GO:0006468
Pral4468g00011 566 CDD MobB_NDR_LATS-like 54 147 - -
Pral4468g00011 566 FunFam Non-specific serine/threonine protein kinase 236 303 - -
Pral4468g00011 566 PANTHER SERINE/THREONINE-PROTEIN KINASE 36 499 - -
Pral4468g00011 566 FunFam Non-specific serine/threonine protein kinase 349 468 - -
Pral4468g00011 566 SUPERFAMILY Protein kinase-like (PK-like) 125 504 IPR011009 -
Pral4468g00011 566 ProSiteProfiles Protein kinase domain profile. 152 450 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4468g00011 566 Gene3D Transferase(Phosphotransferase) domain 1 236 468 - -
Pral4468g00011 566 ProSitePatterns Serine/Threonine protein kinases active-site signature. 271 283 IPR008271 GO:0004672|GO:0006468
Pral4468g00011 566 ProSiteProfiles AGC-kinase C-terminal domain profile. 451 523 IPR000961 GO:0004674|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4468g00011 Pral-Chr4468 80609 88549 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4468g00011 1 546 AGC Kinase Gene Family AT2G20470 74.414 0.0 835
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_NDR Pral4468g00011 Pkinase 1.3e-63 CL0016