Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4468g00010 ATGGATCATTTGGTTGGTGGGAAGTTCAAACTGGGAAGGAAAATTGGGAGTGGTTCTTTTGGGGAGCTTTATTTAGGCGTAAATGTGCAAAATGGAGAGGAGGTAGCCGTTAAGCTGGAACCTGTGAAGACCAGGCATCCTCAACTTTTCTACGAGTCAAAATTGTATATGCTTCTTCAAGGAGGAACGGGGATTCCCCACATCAAATGGTTCGGAGCCGAGGGAGACTATAATGTTATGGTTATTGACCTTCTTGGACCAAGTCTGGAAGATTTGTTCAACTATTGCAATCGGAAATTCACATTGAAGACTGTGTTAATGCTTGCTGATCAATTAATTAACAGAGTTGAATATATGCATTCAAGAGGTTTTCTTCACCGTGATTTAAAGCCTGACAATTTTCTTATGGGCCTAGGACGTAAAGCAAACCAGGTGTACATAATTGACTATGGCCTTGCAAAGAAGTATAGGGATCTTCATACTCATAAGCACATACCATACAGGGAAAACAAGAACCTCACTGGCACAGCTCGCTATGCAAGTGTGAACACTCATCTTGGAATTGAACAAAGCAGAAGGGATGATCTGGAATCTCTTGGTTATGTTCTCATGTACTTCTTAAGAGGAAGTCTTCCTTGGCAGGGACTCAAGGCTGGCACGAAAAAAACAAAATATGATAAGATTAGTGAGAAGAAGGCATCAACTCCTATAGAGGTTCTCTGTAAATCATACCCATCTGAGTTTGGATCTTACTTCCACTATTGCCGATCATTGCGTTTTGAGGACAAGCCAGATTATTCGTATTTAAAGAGACTTTTTCGAGACTTATTTATTCGAGAAGGCTATCAGTTTGACTATGTTTTCGATTGGACCATATTGAAATATCCACAGATTGGTTCTAGCTCTAGAGGACGGCACGGCAGTGGCAAAGCAGCTATGAATGCAGGACCATCTGTGCAAAAGCCGGAAAAGATGTCAGTTGGGAAAGATCCTCGAGAGAAATTCTCTGGCACTGTTGAAGCATTCTCCAGGAGAAACCCCCCAAGCTCTAGTCCTCGGGGTGATCAAACTAGGCAAAGGATGTTTGAGGATGTACAGCAACATAAGGATATGCACCGTGAACAAGAGAAGGTACACAGTTCTGCTCGATACGGAAGCAGTTCAAGGAAAGCCCTCATCTCATCAAACAAGCCGAGTTCGTCGGCTGACCACAGTGATACTCGTACTGGTCGGCTGACTACAAGCAGTAGCCGCCCTTCTACCACACGCGCCTTGTATGAGAGCAAACAACCAAGTTTTACTCGCAATACATCTTCTAGAGGCAATCGTGATGATCCTCTTAGGAGCTTTGAGCTTCTCTCTATCAGGAAGTAA 1374 0.433 MDHLVGGKFKLGRKIGSGSFGELYLGVNVQNGEEVAVKLEPVKTRHPQLFYESKLYMLLQGGTGIPHIKWFGAEGDYNVMVIDLLGPSLEDLFNYCNRKFTLKTVLMLADQLINRVEYMHSRGFLHRDLKPDNFLMGLGRKANQVYIIDYGLAKKYRDLHTHKHIPYRENKNLTGTARYASVNTHLGIEQSRRDDLESLGYVLMYFLRGSLPWQGLKAGTKKTKYDKISEKKASTPIEVLCKSYPSEFGSYFHYCRSLRFEDKPDYSYLKRLFRDLFIREGYQFDYVFDWTILKYPQIGSSSRGRHGSGKAAMNAGPSVQKPEKMSVGKDPREKFSGTVEAFSRRNPPSSSPRGDQTRQRMFEDVQQHKDMHREQEKVHSSARYGSSSRKALISSNKPSSSADHSDTRTGRLTTSSSRPSTTRALYESKQPSFTRNTSSRGNRDDPLRSFELLSIRK 457
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4468g00010 457 FunFam Casein kinase 1-like protein 1 330 - -
Pral4468g00010 457 FunFam Putative Casein kinase I 1 85 - -
Pral4468g00010 457 CDD STKc_CK1_delta_epsilon 8 282 - -
Pral4468g00010 457 SMART serkin_6 9 287 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4468g00010 457 MobiDBLite consensus disorder prediction 300 457 - -
Pral4468g00010 457 MobiDBLite consensus disorder prediction 325 339 - -
Pral4468g00010 457 MobiDBLite consensus disorder prediction 441 457 - -
Pral4468g00010 457 Pfam Protein kinase domain 10 227 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4468g00010 457 ProSitePatterns Protein kinases ATP-binding region signature. 15 38 IPR017441 GO:0005524
Pral4468g00010 457 MobiDBLite consensus disorder prediction 381 440 - -
Pral4468g00010 457 Gene3D Transferase(Phosphotransferase) domain 1 1 344 - -
Pral4468g00010 457 MobiDBLite consensus disorder prediction 342 356 - -
Pral4468g00010 457 ProSitePatterns Serine/Threonine protein kinases active-site signature. 124 136 IPR008271 GO:0004672|GO:0006468
Pral4468g00010 457 ProSiteProfiles Protein kinase domain profile. 9 278 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4468g00010 457 SUPERFAMILY Protein kinase-like (PK-like) 4 290 IPR011009 -
Pral4468g00010 457 PANTHER CASEIN KINASE-RELATED 13 401 - -
Pral4468g00010 457 MobiDBLite consensus disorder prediction 357 380 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4468g00010 Pral-Chr4468 65427 73022 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4468g00010 8 213 MAP Kinase Kinase Kinase AT3G06030 24.537 2.97e-13 70.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1 Pral4468g00010 Pkinase 1.1e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4468g00010 K08960 - qsa:O6P43_006880 773.852