Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00038 ATGCAGGAAGCTAGAGCTTTGTTAGGAAGATATGAATTTCAGAAAGGCAACGTTGAAGCCGCTTTACATGTTTTTGAAGGAATAGATATAGGTGCTGTGACTCCTAAAATTAAAATTTCCCTTGCCCAAAGGGCAGAACAACCTAAGAGACATAAGAGACATTCCCGGCATTATGCTGCACCACCAATGTCAATACATGCTGTTGGCCTACTATTGGAAGCAGTCCTCCTGAAAGCAAAATCGTTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCCGAAGGTTTGCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCAGAACTATGGAAACTTGCTGATAGTCCTCGTGAAGCTATTGTGTCTTTCAGGCGGGCACTCCTTCATCGATGGAATCTTGATGCAGAGACTACAGCAAAGATTCAGAAAGAGTTTGTTATATTTCTTCTATATAGTGGTGGGGAAGCAAGCCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTTTTGATGATTTTGGTAAGAAAAGTCACTTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTATCTGTTTCTGGGGATTTGACAACTCTAGCTAATCGATTGAAAGAATTGCTCCCTGGGACTGTCAGCCGAAGAGAAAGGTATTTTAGTCTTGCTCTCTGTTATTTTGGAGCCGGAAAGGACTTGATGGCACTGGATCTTCTGAGAAAAGTGTTGAGTAGTAAAGAGGACCCTAAACATGTTCCAGCTTTGTTAATGGCATCAAAAATATGTTCTAAGAACCCTAGTCTTGCAGAAGAAGGGGTAAGCTTTGCTTCCAGAGCGCTTGACAGCTTGGATGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTGCGTACTTGGCGTTTCACATTCAGCAAATTCGAAATTAGCCATTTCTGATTCTGAGAGGCTTGACAGGCAATCTGAGGCACTTCGTGCTCTGGAAACCGCTGGCAAAATGACTCGAATGAGAGACCACAATGTATTATACCATCTAAGTTTAGAATATGCGGAACAGAGGAAGTTGGATGCTGCACTTTATTGTGCAAAATGCCTACTAAAACTGGAATCTGGGTCGAATGTCAAAGGGTGGCTGTTGTTAGCTCGAATATTATCAGCTAAAAAACGGTTTTCAGATGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGGGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAAGAGTGCCATTGAGACATATACTCAACTTCTTGCTGTTTTTCAGGTTCAAAAGAAAACATTTGGTCCTGGGAAGAAGCTATATAAGATGTGTGGTTCAGAAAAGAACCGTTCCGGGTGGCTGCTTACCTATTTTCTGTGCTACTTGACTCAGGAGAACAGAGATCATGCTAAGAACCTGGAAGTCGAAGTATGGCATGATCTTGCCTGTGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATTTGTCTTGTGAAGTCTAAGGCCATCAAACTTTACTCAGCTTCTAGATGTCATACAACAGGAACTCTTTATGAAGCAAGGGGTCTCCACAAAGAGGCTTTAAAGGCTTTTGGTGATGCTTTGAACATTGATCCCAATTATGTGCCGAGCTTGATTTCCAGGGCCTTGGTTCTGAGACGGTGCAGCGGTAGTGAGGAATCAAATGCTGTAGCGAGAAGCTTTTTGATGGATGCACTGCGCCATGATAGATTGAATGCTGGCGCATGGTATAATCTTGGCCTTGTTCACAGGGATGAGGGTGCAGTCTCGTCGTTAATGGAAGCTGCGGAATGTTTCGAGGCTGCTCATTTTCTTGAAGAAACTTCGCCTGTTGAACCTTTCAGATGA 2031 0.4264 MQEARALLGRYEFQKGNVEAALHVFEGIDIGAVTPKIKISLAQRAEQPKRHKRHSRHYAAPPMSIHAVGLLLEAVLLKAKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNAVELLPELWKLADSPREAIVSFRRALLHRWNLDAETTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILVRKVTLNRIEWDPSILDHLSFALSVSGDLTTLANRLKELLPGTVSRRERYFSLALCYFGAGKDLMALDLLRKVLSSKEDPKHVPALLMASKICSKNPSLAEEGVSFASRALDSLDDRCDKLESVANCVLGVSHSANSKLAISDSERLDRQSEALRALETAGKMTRMRDHNVLYHLSLEYAEQRKLDAALYCAKCLLKLESGSNVKGWLLLARILSAKKRFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVFQVQKKTFGPGKKLYKMCGSEKNRSGWLLTYFLCYLTQENRDHAKNLEVEVWHDLACVYISLSQWHDAEICLVKSKAIKLYSASRCHTTGTLYEARGLHKEALKAFGDALNIDPNYVPSLISRALVLRRCSGSEESNAVARSFLMDALRHDRLNAGAWYNLGLVHRDEGAVSSLMEAAECFEAAHFLEETSPVEPFR 676
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00038 676 PANTHER PROTEIN NPG1 2 676 IPR043376 -
Pral4467g00038 676 SUPERFAMILY TPR-like 78 478 IPR011990 GO:0005515
Pral4467g00038 676 Gene3D Tetratricopeptide repeat domain 525 672 IPR011990 GO:0005515
Pral4467g00038 676 Gene3D Tetratricopeptide repeat domain 1 524 IPR011990 GO:0005515
Pral4467g00038 676 ProSiteProfiles TPR repeat profile. 562 595 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 414 447 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 528 561 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 450 483 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 634 670 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 257 290 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 562 595 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 379 412 IPR019734 GO:0005515
Pral4467g00038 676 SMART tpr_5 72 105 IPR019734 GO:0005515
Pral4467g00038 676 SUPERFAMILY TPR-like 452 663 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00038 Pral-Chr4467 158287 162698 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00038 2 676 Calmodulin-binding Proteins AT4G28600 56.848 0.0 722
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00038 K21843 - gmx:100800762 986.867