Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00035 ATGAAAAGTAGAATAAGAGAAAGAAGGCGGCGCGATATCAGCAGGAATTTGCGGAGGATAATGAAGTGCCTATGTTCAGGGGAGCAGTTGAGAGGAGCAGACGAAATGTTTCCTTCATCTGAATCTGTTGCATCCAAGGATTATTCAGTGAGTGGGGATTTTTGCGCAGCTGGACAAGTTGACAAGAAGAAGCCGGACACTGGTAATATAGAAGAAGCTGAATCATCCCTTCGTGAGAGTGGTTACTTGAACTACGAGGAAGCTAGAGCTTTGTTAGGAAGATATGAATTTCAGAAAGGCAACGTTGAAGCCGCTTTACATGTTTTTGAAGGAATAGATATAGGTGCTGTGACTCCTAAAATTAAAATTTCCCTTGCCCAAAGGGCAGAACAACCTAAGAGACATAAGAGACATTCCCGGCATTATGCTGCACCACCAATGTCAATACATGCTGTTGGCCTACTATTGGAAGCAGTCCTCCTGAAAGCAAAATCGTTGCAGGCTCTTGGAAGATTTAAAGAAGCTGCCCAATCTTGCAAAGTTATTCTGGACATAGTTGAATCTTCATTACCCGAAGGTTTGCCTGAAAACTTTGGTGCTGAATGTAAATTGCAGGAGACTCTGAGCAATGCGGTTGAGTTGCTTCCAGAACTATGGAAACTTGCTGATAGTCCTCGTGAAGCTATTGTGTCTTTCAGGCGGGCACTCCTTCATCGATGGAATCTTGATGCAGAGACTACAGCAAAGATTCAGAAAGAGTTTGTTATATTTCTTCTATATAGTGGTGGGGAAGCAAGCCCCCCAAATCTCCGTTCCCAAATGGACAGCTCATTTGTGCCCAGAAACAACATAGAAGAGGCTATACTTCTTTTGATGATTTTGGTAAGAAAAGTCACTTTAAATAGAATTGAGTGGGATCCTTCAATTTTAGACCACCTTTCATTTGCTCTATCTGTTTCTGGGGATTTGACAACTCTAGCTAATCGATTGAAAGAATTGCTCCCTGGGACTGTCAGCCGAAGAGAAAGGTATTTTAGTCTTGCTCTCTGTTATTTTGGAGCCGGAAAGGACTTGATGGCACTGGATCTTCTGAGAAAAGTGTTGAGTAGTAAAGAGGACCCTAAACATGTTCCAGCTTTGTTAATGGCATCAAAAATATGTTCTAAGAACCCTAGTCTTGCAGAAGAAGGGGTAAGCTTTGCTTCCAGAGCGCTTGACAGCTTGGATGATAGATGTGATAAGTTAGAAAGTGTTGCCAATTGCGTACTTGGCGTTTCACATTCAGCAAATTCGAAATTAGCCATTTCTGATTCTGAGAGGCTTGACAGGCAATCTGAGGCACTTCGTGCTCTGGAAACCGCTGGCAAAATGACTCGAATGAGAGACCACAATGTATTATACCATCTAAGTTTAGAATATGCGGAACAGAGGAAGTTGGATGCTGCACTTTATTGTGCAAAATGCCTACTAAAACTGGAATCTGGGTCGAATGTCAAAGGGTGGCTGTTGTTAGCTCGAATATTATCAGCTAAAAAACGGTTTTCAGATGCTGAATCTATTATCAACGCTGCTTTGGATCAGACTGGGAAATGGGATCAAGGGGATTTGTTGCGAACAAAAGCTAAACTTCAAATTGCACAGGGCCAGTTAAAGAGTGCCATTGAGACATATACTCAACTTCTTGCTGTTTTTCAGGTTCAAAAGAAAACATTTGGTCCTGGGAAGAAGCTATATAAGATGTGTGGTTCAGAAAAGAACCGTTCCGGGTGGCTGCTTACCTATTTTCTGTGCTACTTGACTCAGGAGAACAGAGATCATGCTAAGAACCTGGAAGTCGAAGTATGGCATGATCTTGCCTGTGTATATATAAGCCTGTCACAGTGGCATGATGCTGAGATTTGTCTTGTGAAGTCTAAGGCCATCAAACTTTACTCAGCTTCTAGATGTCATACAACAGGAACTCTTTATGAAGCAAGGGGTCTCCACAAAGAGGCTTTAAAGGCTTTTGGTGATGCTTTGAACATTGATCCCAATTATGTGCCGAGCTTGATTTCCAGGGCCTTGGTTCTGAGACGGTGCAGCGGTAGTGAGGAATCAAATGCTGTAGCGAGAAGCTTTTTGATGGATGCACTGCGCCATGATAGATTGAATGCTGGCGCATGGTATAATCTTGGCCTTGTTCACAGGGATGAGGGTGCAGTCTCGTCGTTAATGGAAGCTGCGGAATGTTTCGAGGCTGCTCATTTTCTTGAAGAAACTTCGCCTGTTGAACCTTTCAGATGA 2283 0.4288 MKSRIRERRRRDISRNLRRIMKCLCSGEQLRGADEMFPSSESVASKDYSVSGDFCAAGQVDKKKPDTGNIEEAESSLRESGYLNYEEARALLGRYEFQKGNVEAALHVFEGIDIGAVTPKIKISLAQRAEQPKRHKRHSRHYAAPPMSIHAVGLLLEAVLLKAKSLQALGRFKEAAQSCKVILDIVESSLPEGLPENFGAECKLQETLSNAVELLPELWKLADSPREAIVSFRRALLHRWNLDAETTAKIQKEFVIFLLYSGGEASPPNLRSQMDSSFVPRNNIEEAILLLMILVRKVTLNRIEWDPSILDHLSFALSVSGDLTTLANRLKELLPGTVSRRERYFSLALCYFGAGKDLMALDLLRKVLSSKEDPKHVPALLMASKICSKNPSLAEEGVSFASRALDSLDDRCDKLESVANCVLGVSHSANSKLAISDSERLDRQSEALRALETAGKMTRMRDHNVLYHLSLEYAEQRKLDAALYCAKCLLKLESGSNVKGWLLLARILSAKKRFSDAESIINAALDQTGKWDQGDLLRTKAKLQIAQGQLKSAIETYTQLLAVFQVQKKTFGPGKKLYKMCGSEKNRSGWLLTYFLCYLTQENRDHAKNLEVEVWHDLACVYISLSQWHDAEICLVKSKAIKLYSASRCHTTGTLYEARGLHKEALKAFGDALNIDPNYVPSLISRALVLRRCSGSEESNAVARSFLMDALRHDRLNAGAWYNLGLVHRDEGAVSSLMEAAECFEAAHFLEETSPVEPFR 760
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00035 760 Gene3D Tetratricopeptide repeat domain 424 577 IPR011990 GO:0005515
Pral4467g00035 760 SMART tpr_5 646 679 IPR019734 GO:0005515
Pral4467g00035 760 SMART tpr_5 463 496 IPR019734 GO:0005515
Pral4467g00035 760 SMART tpr_5 156 189 IPR019734 GO:0005515
Pral4467g00035 760 SMART tpr_5 534 567 IPR019734 GO:0005515
Pral4467g00035 760 SMART tpr_5 498 531 IPR019734 GO:0005515
Pral4467g00035 760 SMART tpr_5 718 754 IPR019734 GO:0005515
Pral4467g00035 760 SMART tpr_5 612 645 IPR019734 GO:0005515
Pral4467g00035 760 SMART tpr_5 341 374 IPR019734 GO:0005515
Pral4467g00035 760 ProSiteProfiles TPR repeat profile. 646 679 IPR019734 GO:0005515
Pral4467g00035 760 Gene3D Tetratricopeptide repeat domain 154 423 IPR011990 GO:0005515
Pral4467g00035 760 PANTHER PROTEIN NPG1 21 760 IPR043376 -
Pral4467g00035 760 SUPERFAMILY TPR-like 536 747 IPR011990 GO:0005515
Pral4467g00035 760 SUPERFAMILY TPR-like 162 562 IPR011990 GO:0005515
Pral4467g00035 760 Gene3D Tetratricopeptide repeat domain 578 756 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00035 Pral-Chr4467 158287 163615 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00035 11 760 Calmodulin-binding Proteins AT4G28600 56.291 0.0 788
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00035 K21843 - gmx:100800762 1061.6