Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00026 ATGGGAATGTCTGGAGCACTGTCTTCGTCTCTGCCTGTCCACCCAACACCCATAGAAGAGACATATTCCAAGTTACCCGATTCTCAGCAGGTTTTTGTGGAAAAAGAGCACTCGGAAAGACCTGTCGCTTACTCAAGTCATTTAAATTCCAGCGGAGCAGTTGGGCACATGTTTTCATCATCCCCTGGATATTCTACTGATCTTCATCACTCATCCCTTTCACCTCATGGAAAACACTCAAGAAATTCGCATTTTATTTCACAGTCTTCGAGTAACATGGCATCACTGCCATTGACATATTCTTCAAGTACCGGACCACTGCCTTCTACAACATCAACTTGTTATTCCAAAGAAAGTAATGGGTCGTGGGCTTTAGATTCCTTCCCAAACATTCTTGATTTTCCTGTAGATACTTCCATTAAGGATAGTCAAGTAGAAGGCAGTGCCTGCAATATGATGGCACCTGATGAGTATGGTAAAAGAAATGACTGGCAGGAGTGGGCTGATCAACTGATCAATGATGATGATGCATTGGCTTCTAACTGGAACGACATTCTTGTTGACCCCAGCATTCATGATCCTGAACCAAAGGTGTCATGCCAGAATTCAAAATCATCTTCACAATTGCCAGGGCAGCAGTCTCAAGGTCGCCAGCAACTTTCAGCTTCGTTGGGCGAAAAACATGCTAGTGCTCCACCCTCTTCCTCAGCAAATTCTGCTTCTGCCAAGCCACGAATGCGTTGGACACCAGAGCTTCATGAGGCCTTTGTGGAGGCTGTCAGCCAACTTGGTGGGAGTGAAAGAGCAACCCCTAAGGGTGTGCTGAAGCTTATGAAAGTTGAAGGCTTAACAATATATCATGTTAAAAGCCACTTGCAGAAATATAGGACAGCTAGATATAGGCCGGATTCATCTGAAGGATCCTCTGAGAAAAAGTTAACTCCAGTGGAAGAGATGACATCTCTAGACTTGAAAACTGGTATTGAGCTCACTGAAGCTTTGAGACTCCAGATGGAGGTTCAGAAGCGCCTGCATGAACAACTAGAGATTCAAAGGAATTTGCAGTTGCGGATTGAAGAACAAGGAAGGTGCCTCCAAATGATGTTTGAGCAGCAATGCAAATCTGGTGTCGAAAAGTTTAAGGCAGCATCATCTGCCATTGATGATCCCTCTGGAGTGTCATCAGATGCTATTAAAGATTCTTCTGCCAAAACTGAAGTGGATGTCTCCCAAGCGGGCCATTGCCAATCAGGAACTGAGCAAGATAATAGCAATGCCATAGTTGAAGAATGCTTACTGAAAGATGATGACAAGCATAATGCTCCTGAAAGTCACAGTTCTGATAGTCCTAAGCAACATGCGAGTGAAGATGATGTTAATGCTCAACCATCAAAGCGTCAAAGGACAGACGAATAA 1416 0.4414 MGMSGALSSSLPVHPTPIEETYSKLPDSQQVFVEKEHSERPVAYSSHLNSSGAVGHMFSSSPGYSTDLHHSSLSPHGKHSRNSHFISQSSSNMASLPLTYSSSTGPLPSTTSTCYSKESNGSWALDSFPNILDFPVDTSIKDSQVEGSACNMMAPDEYGKRNDWQEWADQLINDDDALASNWNDILVDPSIHDPEPKVSCQNSKSSSQLPGQQSQGRQQLSASLGEKHASAPPSSSANSASAKPRMRWTPELHEAFVEAVSQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGSSEKKLTPVEEMTSLDLKTGIELTEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRCLQMMFEQQCKSGVEKFKAASSAIDDPSGVSSDAIKDSSAKTEVDVSQAGHCQSGTEQDNSNAIVEECLLKDDDKHNAPESHSSDSPKQHASEDDVNAQPSKRQRTDE 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00026 471 MobiDBLite consensus disorder prediction 429 471 - -
Pral4467g00026 471 MobiDBLite consensus disorder prediction 196 243 - -
Pral4467g00026 471 MobiDBLite consensus disorder prediction 65 88 - -
Pral4467g00026 471 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 240 300 IPR017930 -
Pral4467g00026 471 Coils Coil 331 351 - -
Pral4467g00026 471 Pfam MYB-CC type transfactor, LHEQLE motif 328 375 IPR025756 -
Pral4467g00026 471 Gene3D - 242 301 - -
Pral4467g00026 471 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 211 456 IPR044848 GO:0003700
Pral4467g00026 471 Pfam Myb-like DNA-binding domain 245 296 IPR001005 -
Pral4467g00026 471 MobiDBLite consensus disorder prediction 388 426 - -
Pral4467g00026 471 NCBIfam myb-like DNA-binding domain, SHAQKYF class 243 297 IPR006447 GO:0003677
Pral4467g00026 471 MobiDBLite consensus disorder prediction 384 471 - -
Pral4467g00026 471 FunFam Myb family transcription factor 242 300 - -
Pral4467g00026 471 SUPERFAMILY Homeodomain-like 241 297 IPR009057 -
Pral4467g00026 471 MobiDBLite consensus disorder prediction 1 25 - -
Pral4467g00026 471 MobiDBLite consensus disorder prediction 187 245 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00026 Pral-Chr4467 117358 122408 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00026 8 416 G2-like Transcription Factor Family AT4G28610 47.619 2.49e-104 315
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4467g00026 Myb_DNA-binding 1.8e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00026 - - gmx:100810560 623.624