Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00025 ATGGAAGCACGCCCTGCTTTTTCCATTGAAAGATCAAGTGCAAAGCAACTCAGTAGCATGGGAATGTCTGGAGCACTGTCTTCGTCTCTGCCTGTCCACCCAACACCCATAGAAGAGACATATTCCAAGTTACCCGATTCTCAGCAGGTTTTTGTGGAAAAAGAGCACTCGGAAAGACCTGTCGCTTACTCAAGTCATTTAAATTCCAGCGGAGCAGTTGGGCACATGTTTTCATCATCCCCTGGATATTCTACTGATCTTCATCACTCATCCCTTTCACCTCATGGAAAACACTCAAGAAATTCGCATTTTATTTCACAGTCTTCGAGTAACATGGCATCACTGCCATTGACATATTCTTCAAGTACCGGACCACTGCCTTCTACAACATCAACTTGTTATTCCAAAGAAAGTAATGGGTCGTGGGCTTTAGATTCCTTCCCAAACATTCTTGATTTTCCTGTAGATACTTCCATTAAGGATAGTCAAGTAGAAGGCAGTGCCTGCAATATGATGGCACCTGATGAGTATGGTAAAAGAAATGACTGGCAGGAGTGGGCTGATCAACTGATCAATGATGATGATGCATTGGCTTCTAACTGGAACGACATTCTTGTTGACCCCAGCATTCATGATCCTGAACCAAAGGTGTCATGCCAGAATTCAAAATCATCTTCACAATTGCCAGGGCAGCAGTCTCAAGGTCGCCAGCAACTTTCAGCTTCGTTGGGCGAAAAACATGCTAGTGCTCCACCCTCTTCCTCAGCAAATTCTGCTTCTGCCAAGCCACGAATGCGTTGGACACCAGAGCTTCATGAGGCCTTTGTGGAGGCTGTCAGCCAACTTGGTGGGAGTGAAAGAGCAACCCCTAAGGGTGTGCTGAAGCTTATGAAAGTTGAAGGCTTAACAATATATCATGTTAAAAGCCACTTGCAGAAATATAGGACAGCTAGATATAGGCCGGATTCATCTGAAGGATCCTCTGAGAAAAAGTTAACTCCAGTGGAAGAGATGACATCTCTAGACTTGAAAACTGGTATTGAGCTCACTGAAGCTTTGAGACTCCAGATGGAGGTTCAGAAGCGCCTGCATGAACAACTAGAGATTCAAAGGAATTTGCAGTTGCGGATTGAAGAACAAGGAAGGTGCCTCCAAATGATGTTTGAGCAGCAATGCAAATCTGGTGTCGAAAAGTTTAAGGCAGCATCATCTGCCATTGATGATCCCTCTGGAGTGTCATCAGATGCTATTAAAGATTCTTCTGCCAAAACTGAAGTGGATGTCTCCCAAGCGGGCCATTGCCAATCAGGAACTGAGCAAGATAATAGCAATGCCATAGTTGAAGAATGCTTACTGAAAGATGATGACAAGCATAATGCTCCTGAAAGTCACAGTTCTGATAGTCCTAAGCAACATGCGAGTGAAGATGATGTTAATGCTCAACCATCAAAGCGTCAAAGGACAGACGAATAA 1473 0.442 MEARPAFSIERSSAKQLSSMGMSGALSSSLPVHPTPIEETYSKLPDSQQVFVEKEHSERPVAYSSHLNSSGAVGHMFSSSPGYSTDLHHSSLSPHGKHSRNSHFISQSSSNMASLPLTYSSSTGPLPSTTSTCYSKESNGSWALDSFPNILDFPVDTSIKDSQVEGSACNMMAPDEYGKRNDWQEWADQLINDDDALASNWNDILVDPSIHDPEPKVSCQNSKSSSQLPGQQSQGRQQLSASLGEKHASAPPSSSANSASAKPRMRWTPELHEAFVEAVSQLGGSERATPKGVLKLMKVEGLTIYHVKSHLQKYRTARYRPDSSEGSSEKKLTPVEEMTSLDLKTGIELTEALRLQMEVQKRLHEQLEIQRNLQLRIEEQGRCLQMMFEQQCKSGVEKFKAASSAIDDPSGVSSDAIKDSSAKTEVDVSQAGHCQSGTEQDNSNAIVEECLLKDDDKHNAPESHSSDSPKQHASEDDVNAQPSKRQRTDE 490
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00025 490 MobiDBLite consensus disorder prediction 206 264 - -
Pral4467g00025 490 Pfam MYB-CC type transfactor, LHEQLE motif 347 394 IPR025756 -
Pral4467g00025 490 SUPERFAMILY Homeodomain-like 260 316 IPR009057 -
Pral4467g00025 490 MobiDBLite consensus disorder prediction 84 107 - -
Pral4467g00025 490 MobiDBLite consensus disorder prediction 403 490 - -
Pral4467g00025 490 MobiDBLite consensus disorder prediction 215 262 - -
Pral4467g00025 490 Coils Coil 350 370 - -
Pral4467g00025 490 MobiDBLite consensus disorder prediction 11 40 - -
Pral4467g00025 490 MobiDBLite consensus disorder prediction 407 445 - -
Pral4467g00025 490 FunFam Myb family transcription factor 261 319 - -
Pral4467g00025 490 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL11 230 475 IPR044848 GO:0003700
Pral4467g00025 490 Gene3D - 261 320 - -
Pral4467g00025 490 Pfam Myb-like DNA-binding domain 264 315 IPR001005 -
Pral4467g00025 490 NCBIfam myb-like DNA-binding domain, SHAQKYF class 262 316 IPR006447 GO:0003677
Pral4467g00025 490 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 259 319 IPR017930 -
Pral4467g00025 490 MobiDBLite consensus disorder prediction 448 490 - -
Pral4467g00025 490 MobiDBLite consensus disorder prediction 1 40 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00025 Pral-Chr4467 117358 122408 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00025 1 404 G2-like Transcription Factor Family AT4G28610 48.675 1.50e-106 322
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Pral4467g00025 Myb_DNA-binding 1.9e-08 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00025 - - gmx:100810560 648.277