Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00021 ATGGCACCCAACCCTAGGGTGACTGCAGCCTATCGTGCAATGACTGTTCTTGGCATTAAGGAAGTTAAAGTTAAACCAGTATTGAAGCAACTTCTCAAACTGTATGATAAGAACTGGGAACTTATCGAACAAGAGAACTATAGAGCTCTTGCAGATGCTATATTTGAGCAGGAGGAAAAAGAGTTGCAGGGAAAGAGGAAAAAAAACCAGGACAATGATGAAGGAGAGATGGAGGATGAAGAAGCTCAGATGCAAGATGAATCAGTGCGACCTTTGAAGAGGTTACGTTTAAGAGGCCAAGAGAATCAGGCTTCACAACCTCTGAGTATTTGCGGAACCAGTTCAGCTGCCTCCCCATCTAAAATACCTAAAGTAGAAGATGATAAAGTGCCTGAAAGATGTTCCCACCAGCAGCCTCAATACAAGGCAATGTCGCCTCAGTCCAATAAAAGTGCAGAGACTGAAGTTCGCCCTGCCCCGGTGCGAGATAGCATTGTTAACAAGGGAAAGCAACCTTTATCACCTCAAGCTGCTCCTGGAGGAAGAAGATTTGGATCCGAAAGAGCATCTCCATCAGTGCCATGTAAAGAACCTACAGCTGAACGGAGAATTGTGCCGCTACAGAAAGACCAGTTGCCCTATACTTATGCATTAATCAAGCCCAAAGATGAGCCTATAGATGAACTGGTAGATTATGATGCTCCTATTGCAGCAATTCTTCCTGAACTGCCTGGTGGAAGAGACCCTCCGATGCAGCATGATCCAACTAGAAAACAAGACAGGAATGGTTCTTTAATGTCAAAATGTGGAGATGATGGTAGAGGCAAAGGTATTCGGGATTCATCAGATGAAGCGAACCATGAGGTTGCAACAAACCAAGAATGTTCTACTATAGAGATAGCCTCCTCAACATCAGGAGAGGTAAAAATTACTATGAGCTGCAGCTCAGCTCCTGGGAGATCAGAATTTCGTTTGCCTAGTCGAGATCAACTTTTAAAAATGATGGAGGATAAATGTCTGCAATCATATAATATCACTGACCCAAATTTTTCTATCACGAAACTGTTGAGAGATATGTGTGACTGCGTGTTGGAATTCAGAACTGATTCAAATGATGACTCACAGGAGGGATCTGAAATGATGACATCAAGTCTTGTATTGAAGGAATCGCAAGCACGTGATGCTCTGAATATCAGAGGCAATACAGAAGATTTAGGAATGCATGCTGGCACGTCAAATGGATCAATCAACATTCAGTCTTCTTCTGCACTGGTTGCATCTCGCATTTCCACTTCTCCCCCGCTTTTGAGTGGTATGAATGGTGCTATACCAGTCACCAATAAGGCCGGAAGTGATTTTCCAGAGTGTGGTGATGGAAAAGGGCTGGAGGATCCTACATCTCCACATTTAGGTAGTTTGGTTGTTGTTCAACAGCATCAGCTTACTCCCGATGATCTAAGGTCTCTTCATGGTGCTGAAGACCTTTCAAAAGGAGAAGAAAATCTTAGAATTCCATGGGTGAATGAAATAACTAATGATTTCCCTCCACCTTTTCACTATCTGCACCAAAGCATTGGTTTCAGAGATGCTTATGTTAACTGGTGTCTTTCAAACATAAAGTGTGAGGATTACTGTTCAACTTGTTTGGGCGATTGTCTTCTGTCCCCAGCGTCTTGTGTTTGTGCAAATAAAACTGAGGGTGGATATGCATACACGTCTGAAGGGCTACTGAAGGAAAAGTTCTTGGAAGAGTGTATTACCATTAGCCGCAACCCTCAACAACATCAGTTCTATTGTAGAACCTGCCCTCTTGAAAGAGCAAAGAATGATGATTGTTTAGAACCATGCAAAGGACACTTAAAGAGAAAGTTTATCAAAGAATGTTGGGTGAAATGTGGCTGTGTGAAACAATGCGGCAATAGGGTTGTCCAACGAGGAATCACTTTCAAATTGCAGGTGTTTTTCACTTCAGAAGGAAAAGGATGGGGTCTTCGTACCTTAGAGGAGCTGCCAAAAGGTGCATTTGTGTGTGAATTTGTGGGAGAAATATTAACTCTCAAAGAGTTGCACGAGAGAAACATGCAGTGTGCCCAAAATGGAACATACACATATCCAGTTCTATTAGATGCAGATTGGGATTCAGGGGTTATAACTGATAAAGAAGCTCTTTGCTTGGACGCGGCATCTTATGGGAATATTGCTAGGTTTATAAATCACAGATGTTTGGATGCAAACCTGATCGAAATCCCAGTTGAAGTTGAAACCTCGGATCATCACTACTTTCATCTTGCTTTCTTCACATCCAGAAAAGTAGCTGCACTGGAAGAGCTTACTTGGGATTATGGCATTGACTTTGATGACAATGAGGGTCCTGTTAAGCCATTCTCTTGCAGATGTGGCAGCAAGTTCTGCAGGAAGATGAAGCGATCAACTAGGTCCAATAGATCTGCTTCTGTTGCATGA 2463 0.4267 MAPNPRVTAAYRAMTVLGIKEVKVKPVLKQLLKLYDKNWELIEQENYRALADAIFEQEEKELQGKRKKNQDNDEGEMEDEEAQMQDESVRPLKRLRLRGQENQASQPLSICGTSSAASPSKIPKVEDDKVPERCSHQQPQYKAMSPQSNKSAETEVRPAPVRDSIVNKGKQPLSPQAAPGGRRFGSERASPSVPCKEPTAERRIVPLQKDQLPYTYALIKPKDEPIDELVDYDAPIAAILPELPGGRDPPMQHDPTRKQDRNGSLMSKCGDDGRGKGIRDSSDEANHEVATNQECSTIEIASSTSGEVKITMSCSSAPGRSEFRLPSRDQLLKMMEDKCLQSYNITDPNFSITKLLRDMCDCVLEFRTDSNDDSQEGSEMMTSSLVLKESQARDALNIRGNTEDLGMHAGTSNGSINIQSSSALVASRISTSPPLLSGMNGAIPVTNKAGSDFPECGDGKGLEDPTSPHLGSLVVVQQHQLTPDDLRSLHGAEDLSKGEENLRIPWVNEITNDFPPPFHYLHQSIGFRDAYVNWCLSNIKCEDYCSTCLGDCLLSPASCVCANKTEGGYAYTSEGLLKEKFLEECITISRNPQQHQFYCRTCPLERAKNDDCLEPCKGHLKRKFIKECWVKCGCVKQCGNRVVQRGITFKLQVFFTSEGKGWGLRTLEELPKGAFVCEFVGEILTLKELHERNMQCAQNGTYTYPVLLDADWDSGVITDKEALCLDAASYGNIARFINHRCLDANLIEIPVEVETSDHHYFHLAFFTSRKVAALEELTWDYGIDFDDNEGPVKPFSCRCGSKFCRKMKRSTRSNRSASVA 820
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00021 820 MobiDBLite consensus disorder prediction 241 291 - -
Pral4467g00021 820 Pfam Pre-SET motif 496 641 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4467g00021 820 ProSiteProfiles SET domain profile. 649 782 IPR001214 GO:0005515
Pral4467g00021 820 MobiDBLite consensus disorder prediction 138 154 - -
Pral4467g00021 820 Pfam Ubiquitin-binding WIYLD domain 6 60 IPR018848 -
Pral4467g00021 820 ProSiteProfiles Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. 1 820 IPR025776 -
Pral4467g00021 820 MobiDBLite consensus disorder prediction 61 198 - -
Pral4467g00021 820 PANTHER INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED 1 816 - -
Pral4467g00021 820 SMART set_7 649 788 IPR001214 GO:0005515
Pral4467g00021 820 FunFam SET-domain containing protein lysine methyltransferase family protein 495 807 - -
Pral4467g00021 820 Pfam SET domain 661 782 IPR001214 GO:0005515
Pral4467g00021 820 SUPERFAMILY SET domain 501 806 IPR046341 -
Pral4467g00021 820 Gene3D - 1 60 IPR043017 -
Pral4467g00021 820 Gene3D SET domain 495 807 IPR046341 -
Pral4467g00021 820 MobiDBLite consensus disorder prediction 99 120 - -
Pral4467g00021 820 SMART preset_2 492 633 IPR007728 GO:0005634|GO:0008270|GO:0034968|GO:0042054
Pral4467g00021 820 CDD SET_SETDB-like 516 782 - -
Pral4467g00021 820 MobiDBLite consensus disorder prediction 251 287 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00021 Pral-Chr4467 101465 108507 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00021 625 807 C2H2 Transcription Factor Family AT2G23740 40.741 3.35e-30 127
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Pral4467g00021 Pre-SET 9.3e-15 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00021 - - gmx:100787369 905.975