Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Pral4467g00021 | ATGGCACCCAACCCTAGGGTGACTGCAGCCTATCGTGCAATGACTGTTCTTGGCATTAAGGAAGTTAAAGTTAAACCAGTATTGAAGCAACTTCTCAAACTGTATGATAAGAACTGGGAACTTATCGAACAAGAGAACTATAGAGCTCTTGCAGATGCTATATTTGAGCAGGAGGAAAAAGAGTTGCAGGGAAAGAGGAAAAAAAACCAGGACAATGATGAAGGAGAGATGGAGGATGAAGAAGCTCAGATGCAAGATGAATCAGTGCGACCTTTGAAGAGGTTACGTTTAAGAGGCCAAGAGAATCAGGCTTCACAACCTCTGAGTATTTGCGGAACCAGTTCAGCTGCCTCCCCATCTAAAATACCTAAAGTAGAAGATGATAAAGTGCCTGAAAGATGTTCCCACCAGCAGCCTCAATACAAGGCAATGTCGCCTCAGTCCAATAAAAGTGCAGAGACTGAAGTTCGCCCTGCCCCGGTGCGAGATAGCATTGTTAACAAGGGAAAGCAACCTTTATCACCTCAAGCTGCTCCTGGAGGAAGAAGATTTGGATCCGAAAGAGCATCTCCATCAGTGCCATGTAAAGAACCTACAGCTGAACGGAGAATTGTGCCGCTACAGAAAGACCAGTTGCCCTATACTTATGCATTAATCAAGCCCAAAGATGAGCCTATAGATGAACTGGTAGATTATGATGCTCCTATTGCAGCAATTCTTCCTGAACTGCCTGGTGGAAGAGACCCTCCGATGCAGCATGATCCAACTAGAAAACAAGACAGGAATGGTTCTTTAATGTCAAAATGTGGAGATGATGGTAGAGGCAAAGGTATTCGGGATTCATCAGATGAAGCGAACCATGAGGTTGCAACAAACCAAGAATGTTCTACTATAGAGATAGCCTCCTCAACATCAGGAGAGGTAAAAATTACTATGAGCTGCAGCTCAGCTCCTGGGAGATCAGAATTTCGTTTGCCTAGTCGAGATCAACTTTTAAAAATGATGGAGGATAAATGTCTGCAATCATATAATATCACTGACCCAAATTTTTCTATCACGAAACTGTTGAGAGATATGTGTGACTGCGTGTTGGAATTCAGAACTGATTCAAATGATGACTCACAGGAGGGATCTGAAATGATGACATCAAGTCTTGTATTGAAGGAATCGCAAGCACGTGATGCTCTGAATATCAGAGGCAATACAGAAGATTTAGGAATGCATGCTGGCACGTCAAATGGATCAATCAACATTCAGTCTTCTTCTGCACTGGTTGCATCTCGCATTTCCACTTCTCCCCCGCTTTTGAGTGGTATGAATGGTGCTATACCAGTCACCAATAAGGCCGGAAGTGATTTTCCAGAGTGTGGTGATGGAAAAGGGCTGGAGGATCCTACATCTCCACATTTAGGTAGTTTGGTTGTTGTTCAACAGCATCAGCTTACTCCCGATGATCTAAGGTCTCTTCATGGTGCTGAAGACCTTTCAAAAGGAGAAGAAAATCTTAGAATTCCATGGGTGAATGAAATAACTAATGATTTCCCTCCACCTTTTCACTATCTGCACCAAAGCATTGGTTTCAGAGATGCTTATGTTAACTGGTGTCTTTCAAACATAAAGTGTGAGGATTACTGTTCAACTTGTTTGGGCGATTGTCTTCTGTCCCCAGCGTCTTGTGTTTGTGCAAATAAAACTGAGGGTGGATATGCATACACGTCTGAAGGGCTACTGAAGGAAAAGTTCTTGGAAGAGTGTATTACCATTAGCCGCAACCCTCAACAACATCAGTTCTATTGTAGAACCTGCCCTCTTGAAAGAGCAAAGAATGATGATTGTTTAGAACCATGCAAAGGACACTTAAAGAGAAAGTTTATCAAAGAATGTTGGGTGAAATGTGGCTGTGTGAAACAATGCGGCAATAGGGTTGTCCAACGAGGAATCACTTTCAAATTGCAGGTGTTTTTCACTTCAGAAGGAAAAGGATGGGGTCTTCGTACCTTAGAGGAGCTGCCAAAAGGTGCATTTGTGTGTGAATTTGTGGGAGAAATATTAACTCTCAAAGAGTTGCACGAGAGAAACATGCAGTGTGCCCAAAATGGAACATACACATATCCAGTTCTATTAGATGCAGATTGGGATTCAGGGGTTATAACTGATAAAGAAGCTCTTTGCTTGGACGCGGCATCTTATGGGAATATTGCTAGGTTTATAAATCACAGATGTTTGGATGCAAACCTGATCGAAATCCCAGTTGAAGTTGAAACCTCGGATCATCACTACTTTCATCTTGCTTTCTTCACATCCAGAAAAGTAGCTGCACTGGAAGAGCTTACTTGGGATTATGGCATTGACTTTGATGACAATGAGGGTCCTGTTAAGCCATTCTCTTGCAGATGTGGCAGCAAGTTCTGCAGGAAGATGAAGCGATCAACTAGGTCCAATAGATCTGCTTCTGTTGCATGA | 2463 | 0.4267 | MAPNPRVTAAYRAMTVLGIKEVKVKPVLKQLLKLYDKNWELIEQENYRALADAIFEQEEKELQGKRKKNQDNDEGEMEDEEAQMQDESVRPLKRLRLRGQENQASQPLSICGTSSAASPSKIPKVEDDKVPERCSHQQPQYKAMSPQSNKSAETEVRPAPVRDSIVNKGKQPLSPQAAPGGRRFGSERASPSVPCKEPTAERRIVPLQKDQLPYTYALIKPKDEPIDELVDYDAPIAAILPELPGGRDPPMQHDPTRKQDRNGSLMSKCGDDGRGKGIRDSSDEANHEVATNQECSTIEIASSTSGEVKITMSCSSAPGRSEFRLPSRDQLLKMMEDKCLQSYNITDPNFSITKLLRDMCDCVLEFRTDSNDDSQEGSEMMTSSLVLKESQARDALNIRGNTEDLGMHAGTSNGSINIQSSSALVASRISTSPPLLSGMNGAIPVTNKAGSDFPECGDGKGLEDPTSPHLGSLVVVQQHQLTPDDLRSLHGAEDLSKGEENLRIPWVNEITNDFPPPFHYLHQSIGFRDAYVNWCLSNIKCEDYCSTCLGDCLLSPASCVCANKTEGGYAYTSEGLLKEKFLEECITISRNPQQHQFYCRTCPLERAKNDDCLEPCKGHLKRKFIKECWVKCGCVKQCGNRVVQRGITFKLQVFFTSEGKGWGLRTLEELPKGAFVCEFVGEILTLKELHERNMQCAQNGTYTYPVLLDADWDSGVITDKEALCLDAASYGNIARFINHRCLDANLIEIPVEVETSDHHYFHLAFFTSRKVAALEELTWDYGIDFDDNEGPVKPFSCRCGSKFCRKMKRSTRSNRSASVA | 820 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Pral4467g00021 | 820 | MobiDBLite | consensus disorder prediction | 241 | 291 | - | - | |
Pral4467g00021 | 820 | Pfam | Pre-SET motif | 496 | 641 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Pral4467g00021 | 820 | ProSiteProfiles | SET domain profile. | 649 | 782 | IPR001214 | GO:0005515 | |
Pral4467g00021 | 820 | MobiDBLite | consensus disorder prediction | 138 | 154 | - | - | |
Pral4467g00021 | 820 | Pfam | Ubiquitin-binding WIYLD domain | 6 | 60 | IPR018848 | - | |
Pral4467g00021 | 820 | ProSiteProfiles | Histone-lysine N-methyltransferase (EC 2.1.1.43) family profile. | 1 | 820 | IPR025776 | - | |
Pral4467g00021 | 820 | MobiDBLite | consensus disorder prediction | 61 | 198 | - | - | |
Pral4467g00021 | 820 | PANTHER | INACTIVE HISTONE-LYSINE N-METHYLTRANSFERASE SUVR1-RELATED | 1 | 816 | - | - | |
Pral4467g00021 | 820 | SMART | set_7 | 649 | 788 | IPR001214 | GO:0005515 | |
Pral4467g00021 | 820 | FunFam | SET-domain containing protein lysine methyltransferase family protein | 495 | 807 | - | - | |
Pral4467g00021 | 820 | Pfam | SET domain | 661 | 782 | IPR001214 | GO:0005515 | |
Pral4467g00021 | 820 | SUPERFAMILY | SET domain | 501 | 806 | IPR046341 | - | |
Pral4467g00021 | 820 | Gene3D | - | 1 | 60 | IPR043017 | - | |
Pral4467g00021 | 820 | Gene3D | SET domain | 495 | 807 | IPR046341 | - | |
Pral4467g00021 | 820 | MobiDBLite | consensus disorder prediction | 99 | 120 | - | - | |
Pral4467g00021 | 820 | SMART | preset_2 | 492 | 633 | IPR007728 | GO:0005634|GO:0008270|GO:0034968|GO:0042054 | |
Pral4467g00021 | 820 | CDD | SET_SETDB-like | 516 | 782 | - | - | |
Pral4467g00021 | 820 | MobiDBLite | consensus disorder prediction | 251 | 287 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Pral4467g00021 | Pral-Chr4467 | 101465 | 108507 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Pral4467g00021 | 625 | 807 | C2H2 Transcription Factor Family | AT2G23740 | 40.741 | 3.35e-30 | 127 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TR | SET | Pral4467g00021 | Pre-SET | 9.3e-15 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Pral4467g00021 | - | - | gmx:100787369 | 905.975 |