Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00011 ATGCAGAGTGGTTCAACCGTGTCAAAGGAAGATAATTTGGTCATGTCTTCGGAGGATTCTTCTTGCCCAGATGAGGCTGACCTTGAATTGGGTCTTGGCTTAAGCCTTTCTCGTCCTCCTGGGATGAAGTCCCAGCCACCTTCCACGAATCAATTTGCCAGAATATTAACGGCTAAAGATTTTCCTTCTATGGTTTCTTCTCGTTCTGCAACTTCATTAGCCTCATCAACCTCCTCCTCATCTTCTTCCTCTTCCTCTCCTTCCTCTGTGACCAGGCCTAACGCCACTGCTGGCACCAAGAGAACTGCCGATTCTGTTGTTGCTGCTAATGGCCCCAGTCAGGTTGTTGGATGGCCTCCTGTGGGAGCATATCGAATGAATAGCTTTAACAATCATGCAAAGTCAACTGTCACTAACGTGTTCAACTCAGTGACAGAGAAAAGTAAGAGCAATAATACAGAGGCAAGGAGGAGTACTGATAATGGCATCGATAATAGCAATGCTAATGCCAAAGGTAATGGGCACCTGAAGAGTTCCTCGTTTGTGAAGGTAAATGTGGACGGGTTACCAATTGGAAGGAAGGTTGATTTGAGTGCTCATAATTCCTATGAAAGCTTAGCACTTGCTTTGGAGGAGATGTTCGATGAACATGCTGCAACTGTTTCTAGTAAAAGATCAAATGGAGAAGAACATGGCGTTATAGTCGGAGGAGCGGAAAGACGGTCAAAATGGCTGGATGGATCTTCCAAGTTTGTACTTACTTATGAAGACAAGGATGGAGACTGGATGCTTGTTGGGGATGTACCTTGGGGGATGTTTCTAAGCTCAGTGAGGAGGCTGAGGATCATGAGAACGTCTGAGGCTAATGGACTGGCACCAAAGTCTGAAGAAAAGAACAGCAGGCAGAGAAGTTTGCGCGCATAG 924 0.4589 MQSGSTVSKEDNLVMSSEDSSCPDEADLELGLGLSLSRPPGMKSQPPSTNQFARILTAKDFPSMVSSRSATSLASSTSSSSSSSSSPSSVTRPNATAGTKRTADSVVAANGPSQVVGWPPVGAYRMNSFNNHAKSTVTNVFNSVTEKSKSNNTEARRSTDNGIDNSNANAKGNGHLKSSSFVKVNVDGLPIGRKVDLSAHNSYESLALALEEMFDEHAATVSSKRSNGEEHGVIVGGAERRSKWLDGSSKFVLTYEDKDGDWMLVGDVPWGMFLSSVRRLRIMRTSEANGLAPKSEEKNSRQRSLRA 307
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00011 307 MobiDBLite consensus disorder prediction 140 175 - -
Pral4467g00011 307 MobiDBLite consensus disorder prediction 41 108 - -
Pral4467g00011 307 ProSiteProfiles PB1 domain profile. 179 287 IPR000270 GO:0005515
Pral4467g00011 307 FunFam Auxin-responsive protein 174 295 - -
Pral4467g00011 307 MobiDBLite consensus disorder prediction 1 108 - -
Pral4467g00011 307 SUPERFAMILY CAD & PB1 domains 176 283 - -
Pral4467g00011 307 Gene3D - 175 297 - -
Pral4467g00011 307 PANTHER AUXIN-RESPONSIVE PROTEIN IAA17 27 290 IPR003311 GO:0005634|GO:0006355
Pral4467g00011 307 MobiDBLite consensus disorder prediction 1 19 - -
Pral4467g00011 307 Pfam AUX/IAA family 29 294 IPR033389 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00011 Pral-Chr4467 59972 63351 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00011 180 307 B3 DNA Binding Superfamily AT1G59750 29.688 3.01e-12 65.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR AUX/IAA Pral4467g00011 AUX_IAA 2e-60 CL0072
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00011 K14484 - gmx:100779400 347.821