Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00010 ATGAATCTCAGTGGCAAAGTATCCGATGAGATACAAAAGCTACAAAGTCTCACTACTCTAAACTTATGTTGCAATGTATTCTCCACAACATTGCCAAAATCTGTTGCCAACCTCACCACATTGAGAAGTCTTGATGTCAGCCAGAATTTCTTCGTTGGTGATTTTCCATTAGGTCTTGGAAAGGCACCACGACTAGTGATTTTAAATGCATCCAGCAATGATTTCTCAGGTTTTGTTCCTGAGGACCTTGGAAATGCTTCTTTCTTAGAGACGCTGGATCTCAGAGGCAGCTTCTTCCAAGGGTCTATTCCAAGATCGTTCAGCAGATTGCAGAAGTTGAGGTTCCTTGGTCTTTCTGGAAACAATCTCACTGGAGAAATTCCAGGAGATCTGGGACAGCTTTCCTCACTGGAGTATATGATTCTCGGGTACAATGCATTTGAGGGTGGGATTCCTAGAGAGTTTGGAAATCTCACCAATCTCAAATATCTTGATATGGCAGAAGGCAATCTTGGAGGTGAAATTCCAGCTGAATTGGGAAACCTGAAATTACTTCGCACGGTTTTCTTATACAGAAACAATTTTAAAGGCGGAATCCCTCCTTCTTTGGGCAATCAGACTTCGTTGGTGTTGCTGGATTTCTCTGATAACATGCTATCAGGAAAAATTCCACCTGAAATTGGTCAACTGAAGAATTTAGAGCTCCTCAATTTCATGAGCAATCTTCTATCTGGTCCTGTGCCTTCTGAACTTGGGGATTTGCCTCAATTGAAGGTTCTTGAGCTATGGAACAATTCTTTGTCAGGAACATTGCCAAATCGCCTGGGCAATAGTTCGCCATTGCAATGGCTTGATGTATCATCCAACTCTATAGCTGGTGGGATTCCAGAAACAATTTGCGGCCAGGGCAATCTCACCAAGCTTATTCTTTTCAATAATGCCTTCACAGGTCCAATCCCAGTCAACTTATCATTGTGCCCTTCACTGGTTCGTGTCCGAATTCATAACAATTTACTTAATGGGACGATTCCAGTTGGTTTTGGGAAGCTTGGGAATCTTGAAAGGTTAGAATTGGCTAACAACAGTCTCACTGGTGAAATTCCGAATGACATTGCTTCTTCCACATCTCTTTCTTTCATTGATTTCTCCAGAAACAACCTCCATTCTTCTCTCCCTTCTGCTATTCTTTCCACTCCGAATCTCCAATCATTCATGGTCTCCCACAACAATTTGGAAGGTGAAATCCCAGACCAATTTCAGGACTGTCCTTCACTCGGTGTTCTTGATCTGTCATCAAATCGTCTCTCTGGAAGCATTCCTGCCAGCATTGCTTCTTGTCAGAAATTGGTTAACTTGAACCTAAAAAACAACCAGTTGTCTGGTAAAATCCCGAAGGCACTTGCCAACATGCCTTCATTGGCCATTCTTGATTTTTCCAACAACTCTCTGACCGGTGAAATACCTGGTAGCTTTGGTATTTCTCCTGCTCTGGAGGCTCTCAATTTCTCGTATAACAAGCTTGAGGGTCCTGTCCCCACAAATGGCATGCTTAGAACTATTAACCCAAGTGATCTTGTGGGTAATGCAGGCCTATGTGGTGGCGTCCTTCCTCCATGTGGCCAAAACTCTGCATATGCATTGAAGCATGGAAGCTCACGAGCAAAACACATAATCACAGGATGGGTCGTTGGAATATCATCAGTGTTGGCCATTGGGATTGCCATTTTCGTTGCTAGATCTATATGCGTGAAATGGTACTCCAATGGCTTCTGCGTTGGAGAAAAGATTTATAAGGGTGACAAAAGGTGGCCGTGGAGATTGATGGCATTTCAGAGGCTTAATTTTACAAGTACTGAAATTCTAGCATGCATCAAGGAAACAAATGTGATTGGAATGGGAGCAACTGGTGTTGTTTATAAGGCTGAAATATCGCACTCAAATACAGTTGTGGCAGTGAAAAAATTGTGGAAATCTGGATCTGATACTGAGGTAGGAAGTAGTGATGACCTTGTTGGAGAGGTAAATCTGTTGGGTAGGCTAAGACATAGAAATATCGTTAGATTACTAGGATATCTTTATAATGACGTTGATGTTATGATAGTTTATGAATTTATGTCTAATGGCAACCTTGGAGATGCCTTGCATGGCAAACACGCTGGAAGGTTGCTTGTAGACTGGGCTTCTCGTTATAAGATAGCTCTAGGAGTTGCACAAGGGCTTGCTTATCTTCATCATGACTGTCATCCACAGATCATCCACCGAGACATCAAGTCTAACAACATACTGCTTGATGCAAATCTTGAGGCAAGGATAGCAGATTTTGGATTGGCCAAAATGATGATCAGAAAGAATGAAACAGTCTCCATGATTGCCGGGTCCTATGGCTACATTGCCCCGGAATATGGATATACCTTGAAGGTGGACGAAAAGATTGACACTTACAGCTATGGAGTAGTTCTGTTGGAGCTTCTCACAGGGAAGAGGCCACTGGATTCTGAGTTTGGAGAATCTGTGGACATTGTTGAGTGGATTAGGAGGAAGATTAGAGATAACAAGCCTCTAGAAGAAGCATTAGACCCAAGTGTAGGAAACTGTAGGCACGTTGTAGAGGAGATGCTTTTAGTTCTTAGAGTATCACTTCTTTGCACAGCCAAGCTACCCAAAGACAGACCCCCCATGACAGATGTGATAATGATGCTTGAAGAGGCAAAGCCTCGGAGTAAAAGCGATCGCAACAATCAAAAACATGAACCTAATAAGATGATGTCAGTTTTTAGCACATCATCACCTGTTAGTGGCCTTGTGTAG 2808 0.4263 MNLSGKVSDEIQKLQSLTTLNLCCNVFSTTLPKSVANLTTLRSLDVSQNFFVGDFPLGLGKAPRLVILNASSNDFSGFVPEDLGNASFLETLDLRGSFFQGSIPRSFSRLQKLRFLGLSGNNLTGEIPGDLGQLSSLEYMILGYNAFEGGIPREFGNLTNLKYLDMAEGNLGGEIPAELGNLKLLRTVFLYRNNFKGGIPPSLGNQTSLVLLDFSDNMLSGKIPPEIGQLKNLELLNFMSNLLSGPVPSELGDLPQLKVLELWNNSLSGTLPNRLGNSSPLQWLDVSSNSIAGGIPETICGQGNLTKLILFNNAFTGPIPVNLSLCPSLVRVRIHNNLLNGTIPVGFGKLGNLERLELANNSLTGEIPNDIASSTSLSFIDFSRNNLHSSLPSAILSTPNLQSFMVSHNNLEGEIPDQFQDCPSLGVLDLSSNRLSGSIPASIASCQKLVNLNLKNNQLSGKIPKALANMPSLAILDFSNNSLTGEIPGSFGISPALEALNFSYNKLEGPVPTNGMLRTINPSDLVGNAGLCGGVLPPCGQNSAYALKHGSSRAKHIITGWVVGISSVLAIGIAIFVARSICVKWYSNGFCVGEKIYKGDKRWPWRLMAFQRLNFTSTEILACIKETNVIGMGATGVVYKAEISHSNTVVAVKKLWKSGSDTEVGSSDDLVGEVNLLGRLRHRNIVRLLGYLYNDVDVMIVYEFMSNGNLGDALHGKHAGRLLVDWASRYKIALGVAQGLAYLHHDCHPQIIHRDIKSNNILLDANLEARIADFGLAKMMIRKNETVSMIAGSYGYIAPEYGYTLKVDEKIDTYSYGVVLLELLTGKRPLDSEFGESVDIVEWIRRKIRDNKPLEEALDPSVGNCRHVVEEMLLVLRVSLLCTAKLPKDRPPMTDVIMMLEEAKPRSKSDRNNQKHEPNKMMSVFSTSSPVSGLV 935
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00010 935 Gene3D Ribonuclease Inhibitor 252 546 IPR032675 -
Pral4467g00010 935 ProSiteProfiles Protein kinase domain profile. 624 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4467g00010 935 Gene3D Ribonuclease Inhibitor 118 185 IPR032675 -
Pral4467g00010 935 Gene3D Ribonuclease Inhibitor 186 251 IPR032675 -
Pral4467g00010 935 ProSitePatterns Serine/Threonine protein kinases active-site signature. 751 763 IPR008271 GO:0004672|GO:0006468
Pral4467g00010 935 Gene3D Transferase(Phosphotransferase) domain 1 709 929 - -
Pral4467g00010 935 FunFam MDIS1-interacting receptor like kinase 1 624 708 - -
Pral4467g00010 935 ProSitePatterns Protein kinases ATP-binding region signature. 630 654 IPR017441 GO:0005524
Pral4467g00010 935 SUPERFAMILY RNI-like 173 512 - -
Pral4467g00010 935 SMART serkin_6 624 907 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4467g00010 935 MobiDBLite consensus disorder prediction 901 917 - -
Pral4467g00010 935 Gene3D Phosphorylase Kinase; domain 1 623 708 - -
Pral4467g00010 935 MobiDBLite consensus disorder prediction 901 935 - -
Pral4467g00010 935 SUPERFAMILY L domain-like 2 225 - -
Pral4467g00010 935 Pfam Leucine Rich Repeat 89 110 IPR001611 GO:0005515
Pral4467g00010 935 Pfam Leucine Rich Repeat 352 371 IPR001611 GO:0005515
Pral4467g00010 935 MobiDBLite consensus disorder prediction 918 935 - -
Pral4467g00010 935 FunFam MDIS1-interacting receptor like kinase 1 709 919 - -
Pral4467g00010 935 PANTHER LRR RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE-RELATED 113 902 - -
Pral4467g00010 935 SMART LRR_typ_2 110 134 IPR003591 -
Pral4467g00010 935 SMART LRR_typ_2 470 493 IPR003591 -
Pral4467g00010 935 SMART LRR_typ_2 254 278 IPR003591 -
Pral4467g00010 935 SMART LRR_typ_2 182 206 IPR003591 -
Pral4467g00010 935 SMART LRR_typ_2 14 38 IPR003591 -
Pral4467g00010 935 SMART LRR_typ_2 350 374 IPR003591 -
Pral4467g00010 935 SMART LRR_typ_2 422 446 IPR003591 -
Pral4467g00010 935 SUPERFAMILY Protein kinase-like (PK-like) 619 901 IPR011009 -
Pral4467g00010 935 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 97 198 - -
Pral4467g00010 935 Pfam Leucine rich repeat 399 459 IPR001611 GO:0005515
Pral4467g00010 935 FunFam Leucine-rich repeat receptor-like protein kinase PXL1 283 543 - -
Pral4467g00010 935 FunFam Leucine-rich repeat receptor protein kinase EMS1 199 282 - -
Pral4467g00010 935 Pfam Protein kinase domain 626 845 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4467g00010 935 Gene3D Ribonuclease Inhibitor 1 106 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00010 Pral-Chr4467 53521 58842 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00010 1 909 Receptor kinase-like Gene Family AT1G08590 60.691 0.0 1085
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4467g00010 Pkinase 1.5e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00010 - - gmx:100811284 1502.65