Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4467g00008 ATGAGGAAAACATCTGAGTGCTTGAGGAACATGAGGATCCTCAAGTTGCAAGCTTGGGAGGATCGATATCGAATACAGTTGGAAGAAATGCGCGGAGTAGAGTTCAAGTGGCTACGTAAAGCCCTCTATTCTCAGGCTTTCATCACTTTCATCTTTTGGAGCTCTCCTATATTTGTTTCTGCTATCACTTTTGGCACTTCAATATTGTTGGGGGATCAGTTGACTGCAGGTGGAGTTCTCTCTGCTCTTGCTACTTTCAGGATCCTTCAAGAGCCTTTGAGGAATTTTCCTGACTTGGTATCGACAATGGCGCAGACGAAAGTTTCTCTTGATCGCATATCTAGTTTCTTGCAGGAGGAAGAATTGCAAGAGGATGCAACCACCGTCTTGCCACGAGGAACTTCTGACATTGCCATTGAGATTGAGGACGGAGTCTTCTACTGGGACCCTTCTTCTAGGCCTACTCTTTCAGGTATACAAATGAAAGTGAAAAGGGGCATGCGTGTGGCTGTTTGCGGCATGGTCGGTTCTGGGAAATCAAGCTTCCTTTCTTGCATCCTTGGAGAGATTCCTAAGCTTTCTGGTGAAGTAAGAGTGTGTGGTTCAGCGGCATATGTCTCCCAGTCAGCATGGATACAGTCAGGAAATATTGAAGAAAATATCCTTTTTGGAAGCCCTATGGATAAAGCAAAGTACAAGAGAGTTCTTCATGCTTGTTCACTGAAGAGGGACTTGGAACTCTTCTCTCATGGAGACCAAACAATTATAGGCGATAGAGGTATAAACTTGAGTGGAGGCCAGAAACAGCGGGTGCAGCTTGCACGAGCTCTTTATCAAGATGCTGATATTTATCTCCTTGATGATCCTTTCAGTGCAGTTGATGCTCACACTGGATCAGAACTGTTTAACGAATACATACTGACAGCGCTAGCAGATAAAACAGTTATTTTTGTGACCCATCAAGTGGAATTTCTCCCTTCAGCTGATTTGATACTGGTTCTTAAAGAAGGCCAAATCATACAGGCAGGAAAATACGATGATCTTTTACAAGCAGGAACAGATTTCAAAACTCTAGTTTCGGCTCATCATGAAGCCATTGAGGCTATGGATATTCCTAACCACTCAGAAGATTCAGATGAAAATGTGTCCTTGGAGGCATCTGTTATGGCCAGTAAAACGTCCATTATATCTGCAAATGATATTGAAAGCCTAGCCAAGGAAATGCAAGAGGGTTCATCAGTTTCAGAACAGAAAGCAATCAAGGAGAAGAAGAAAGCAAAGCGGTCAAGGAAAAAACAACTTGTTCAGGAAGAGGAGAGGGTCAGAGGTAGAGTCAGCATGAGGGTGTACTTGTCATACATGGCTGCAGCATATAAAGGCTTACTGATTCCACCCATAATCATTGCGCAAGCATTGTTTCAGTTTCTTCAAATTGCTAGTAATTGGTGGATGGCTTGGGCAAATCCTCAAACTGAAGGAGACCAACCCAAAGTAACTCCTATGGTTCTTCTTCTGGTGTACATGGCTCTTGCTTTTGGAAGCTCTTGGTTTATATTTATAAGGGCTGTTCTGGTAGCTACATTTGGGCTAGCAGCTGCACAGAAACTTTTTATAAAAATGCTTAGAAGTGTTTTCCATGCACCAATGTCTTTCTTTGACTCCACGCCAGCTGGAAGGATATTGAACCGTGTATCGATTGATCAGAGTGTTGTGGATCTTGACATTCCTTTTAGACTAGGAGGATTTGCTTCGACAACAATACAACTTATTGGGATTGTTGGTGTAATGACAAAGGTTACCTGGCAAATTTTGCTTCTGGTTGTCCCGATGGCTGTGGCTTGTTTGTGGATGCAGAAATACTACATGGCTTCGTCAAGAGAGCTGGTCCGTATAGTAAGCATCCAGAAATCTCCAGTTATACATCTTTTTGGTGAATCAATTGCTGGAGCAGCCACCATCAGGGGTTTTGGACAAGAAAAAAGGTTCATGAAGAGAAACCTCTATCTTCTGGACTCTTTTGCTCGGCCATTCTTCTGCAGTCTTGCAGCTATTGAGTGGCTCTGCCTGCGTATGGAATTATTGTCAACCTTTGTGTTTGCTTTCTGCATGATTTTACTAGTGAGCTTTCCACATGGGAGTATTGACCCTAGCATGGCTGGTCTTGCTGTGACGTATGGCTTGAATTTAAATGCCCGCCTATCACGGTGGATTCTTAGCTTTTGCAAACTTGAGAATAAAATAATTTCTATTGAAAGGATTTATCAGTACAGCCAAATTCCGAGTGAAGCACCAACTGTTATTGAAGACACTCGCCCTCCATCCACATGGCCTGAGAATGGCACAATCAGTATAATTGATTTGAAGGTTCGTTACAAGGAGAATCTTCCATTGGTGCTTCATGGAACATCATGCACATTTCCTGGTGGGAAGAAGATTGGAATAGTTGGACGTACTGGCAGTGGCAAATCTACTTTGATACAAGCATTGTTTCGATTGGTTGAACCATCAAGCGGCAGTATCCATATAGACGACATTGATATTACAAGCATTGGTCTTCATGACCTTCGAAGCCGTCTCAGTATCATACCTCAAGATCCAACCTTATTTGAAGGGACTATACGAGGCAATCTCGATCCTCTTGAAGAGCACTCTGATAAAGAGATTTGGGAGGCGCTAGATAAGTCTCAGCTCAGAGATATTATTCGGCAGAAAGAAGAAAAGCTTGATACGCAAGTGCTTGAAAATGGTGATAATTGGAGCGTAGGGCAGCGACAACTTGTGGCGCTGGGGCGGGCTTTATTGAAGCAATCAAGGATACTTGTACTTGATGAAGCAACAGCATCAGTTGATACAGCAACTGATAATCTTATACAGAAGATTATTCGGACAGAGTTTAAAGATTGCACTGTCTGCACTATTGCACATCGTATCCCTACTGTTATTGACAGTGATCTTGTTCTAGTCCTCAGTGATGGTCGAGTGGCAGAGTTTGACACGCCATCCCGACTATTAGAGGATAAGTCCTCGATGTTCCTGAAGTTGGTGACAGAGTATTCATCAAGGTCAAGTGGCATACCAGATTTTTGA 3087 0.4299 MRKTSECLRNMRILKLQAWEDRYRIQLEEMRGVEFKWLRKALYSQAFITFIFWSSPIFVSAITFGTSILLGDQLTAGGVLSALATFRILQEPLRNFPDLVSTMAQTKVSLDRISSFLQEEELQEDATTVLPRGTSDIAIEIEDGVFYWDPSSRPTLSGIQMKVKRGMRVAVCGMVGSGKSSFLSCILGEIPKLSGEVRVCGSAAYVSQSAWIQSGNIEENILFGSPMDKAKYKRVLHACSLKRDLELFSHGDQTIIGDRGINLSGGQKQRVQLARALYQDADIYLLDDPFSAVDAHTGSELFNEYILTALADKTVIFVTHQVEFLPSADLILVLKEGQIIQAGKYDDLLQAGTDFKTLVSAHHEAIEAMDIPNHSEDSDENVSLEASVMASKTSIISANDIESLAKEMQEGSSVSEQKAIKEKKKAKRSRKKQLVQEEERVRGRVSMRVYLSYMAAAYKGLLIPPIIIAQALFQFLQIASNWWMAWANPQTEGDQPKVTPMVLLLVYMALAFGSSWFIFIRAVLVATFGLAAAQKLFIKMLRSVFHAPMSFFDSTPAGRILNRVSIDQSVVDLDIPFRLGGFASTTIQLIGIVGVMTKVTWQILLLVVPMAVACLWMQKYYMASSRELVRIVSIQKSPVIHLFGESIAGAATIRGFGQEKRFMKRNLYLLDSFARPFFCSLAAIEWLCLRMELLSTFVFAFCMILLVSFPHGSIDPSMAGLAVTYGLNLNARLSRWILSFCKLENKIISIERIYQYSQIPSEAPTVIEDTRPPSTWPENGTISIIDLKVRYKENLPLVLHGTSCTFPGGKKIGIVGRTGSGKSTLIQALFRLVEPSSGSIHIDDIDITSIGLHDLRSRLSIIPQDPTLFEGTIRGNLDPLEEHSDKEIWEALDKSQLRDIIRQKEEKLDTQVLENGDNWSVGQRQLVALGRALLKQSRILVLDEATASVDTATDNLIQKIIRTEFKDCTVCTIAHRIPTVIDSDLVLVLSDGRVAEFDTPSRLLEDKSSMFLKLVTEYSSRSSGIPDF 1028
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4467g00008 1028 CDD ABC_6TM_ABCC_D2 466 757 IPR044726 GO:0140359
Pral4467g00008 1028 CDD ABCC_MRP_domain1 139 338 - -
Pral4467g00008 1028 CDD ABCC_MRP_domain2 780 1000 - -
Pral4467g00008 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 135 360 IPR027417 -
Pral4467g00008 1028 Gene3D ABC transporter type 1, transmembrane domain 424 763 IPR036640 GO:0005524|GO:0016020
Pral4467g00008 1028 SMART AAA_5 165 346 IPR003593 GO:0016887
Pral4467g00008 1028 SMART AAA_5 808 993 IPR003593 GO:0016887
Pral4467g00008 1028 Gene3D - 134 366 IPR027417 -
Pral4467g00008 1028 ProSitePatterns ABC transporters family signature. 263 277 IPR017871 GO:0005524|GO:0016887
Pral4467g00008 1028 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 772 1012 IPR027417 -
Pral4467g00008 1028 Gene3D - 765 1018 IPR027417 -
Pral4467g00008 1028 SUPERFAMILY ABC transporter transmembrane region 465 762 IPR036640 GO:0005524|GO:0016020
Pral4467g00008 1028 FunFam ABC transporter C family member 3 765 1017 - -
Pral4467g00008 1028 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1 105 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4467g00008 1028 FunFam ABC transporter C family member 5 124 370 - -
Pral4467g00008 1028 SUPERFAMILY ABC transporter transmembrane region 4 121 IPR036640 GO:0005524|GO:0016020
Pral4467g00008 1028 Pfam ABC transporter transmembrane region 5 93 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4467g00008 1028 Pfam ABC transporter transmembrane region 467 707 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4467g00008 1028 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 466 735 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Pral4467g00008 1028 FunFam ABC transporter C family member 5 426 763 - -
Pral4467g00008 1028 Gene3D ABC transporter type 1, transmembrane domain 1 128 IPR036640 GO:0005524|GO:0016020
Pral4467g00008 1028 MobiDBLite consensus disorder prediction 408 434 - -
Pral4467g00008 1028 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 1019 - -
Pral4467g00008 1028 Pfam ABC transporter 156 290 IPR003439 GO:0005524
Pral4467g00008 1028 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 782 1016 IPR003439 GO:0005524
Pral4467g00008 1028 Pfam ABC transporter 799 947 IPR003439 GO:0005524
Pral4467g00008 1028 Coils Coil 420 440 - -
Pral4467g00008 1028 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 139 361 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4467g00008 Pral-Chr4467 27332 41975 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4467g00008 152 354 Calmodulin-binding Proteins AT2G36910 31.081 1.32e-19 93.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4467g00008 - - gmx:100790550 1830.45