Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4463g00009 ATGAAAAGACAGATAGAAAACCAAAACAGAGAGAGCTTAGATCTGGCCATCTCTCTAATGCTTCTCTCTCAACCGGCATCCAAGGCCCTCAACATGTCATCGTTGCCTCATGAATTTGAATGCAAGACCTGCAACCGCAAGTTCTCGTCGTTTCAGGCGCTCGGAGGTCACAGAGCCAGCCACAAGAAGCCCAGACTTGATTCCCAAGTAGAGTTACAGAAACCCCATTCGGAGAAATCGTTGCACGAGTGTTCTATTTGTGGGCAGCGATTCTCTCTGGGACAAGCTCTGGGAGGCCACATGCGAAAGCACAGAGCAGCCATGAACGAAGCCTCTGCTTCCATAAATGAGGTGATTTCTGATGTCCCAGTTCTCAGACGATCAAACAGCAGCAAAAGGGTTATGTGCTTGGACTTGAACCTGACCCCTCTCGAGAACGATTTGAAGTTGCTTTTCGGAAACAAGGCTCCTTCTGTTAATCTTTCCATGTGCTGA 495 0.4828 MKRQIENQNRESLDLAISLMLLSQPASKALNMSSLPHEFECKTCNRKFSSFQALGGHRASHKKPRLDSQVELQKPHSEKSLHECSICGQRFSLGQALGGHMRKHRAAMNEASASINEVISDVPVLRRSNSSKRVMCLDLNLTPLENDLKLLFGNKAPSVNLSMC 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4463g00009 164 Gene3D Classic Zinc Finger 37 104 - -
Pral4463g00009 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 82 109 IPR013087 -
Pral4463g00009 164 Pfam C2H2-type zinc finger 39 64 - -
Pral4463g00009 164 Pfam C2H2-type zinc finger 82 106 - -
Pral4463g00009 164 SUPERFAMILY beta-beta-alpha zinc fingers 39 104 IPR036236 -
Pral4463g00009 164 ProSitePatterns Zinc finger C2H2 type domain signature. 84 104 IPR013087 -
Pral4463g00009 164 PANTHER ZINC FINGER PROTEIN ZAT5 10 147 - -
Pral4463g00009 164 SMART c2h2final6 82 104 IPR013087 -
Pral4463g00009 164 SMART c2h2final6 39 61 IPR013087 -
Pral4463g00009 164 ProSiteProfiles Zinc finger C2H2 type domain profile. 39 66 IPR013087 -
Pral4463g00009 164 ProSitePatterns Zinc finger C2H2 type domain signature. 41 61 IPR013087 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4463g00009 Pral-Chr4463 45098 45769 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4463g00009 1 161 C2H2 Transcription Factor Family AT2G37430 47.126 2.95e-49 155
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Pral4463g00009 zf-C2H2_6 7.4e-10 CL0361
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4463g00009 - - aprc:113870747 208.764