Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4461g00001 ATGTATGCCGTAAGCGTAGAAACAGAGGCTCTCCTTCAGTTCAAGAAGCATTTGAAGGACCCTTTGGATTCTTTGGCTTCCTGGACAGATTCAGAGTCTCCCTGTGAATTCCATGGAGTTACTTGTGATAGATTTTCCGGGAAAGTCGTAGGAATTTCGCTGGAAAACAAGTCCCTTTCCGGGGAGATTTTCGCATCAATTTTTGCTCTCGAGAACCTCCGAGTTCTGTCACTCGCATCAAATTTTATTTCTGGGAAGCTTCCATTTGAAGTAAGCAACTGCAGCAACCTTAGAGTTTTGAACCTAACAGAAAATGATATGGTTGGGATTATCCCAGACTTGTCTGTGATGAGAAATCTCAAAGTTCTTGACCTCTCCGCAAACTACTTTTCCGGCGAATTCCCAAGCTGGGTCGGAAACCTGACTGGTCTCGTTTCGCTGGGGCTTGGGGAAAATGAATATATTGAGAGTGAAGTTCCTGAGACTCTTGGCAATCTGAAGAACTTGACTTGGCTCTATCTTGGTGGTTCTCATTTGAGAGGAGAGATTCCAGAATCAGTTTATGAAATGAAGGCTCTGGAGACACTGGATATCTCGAGAAACATGATCTCAGGGAAACTTTCCCAGTCAATTTGGAAGTTGGAAAATCTTCGTAAGATTGAGCTTTTCTCAAATACCTTAACTGGGAAAATCCCAGCTGAGCTGGCAAACTTGACCAAGCTTGAAGAGATTGACATTTCAATGAACCATTTATATGGCGAATTGCCAGAGGTGATCGGTACTATGGAGAATTTGGTTGTTTTTCAGCTCTATGAAAACAACTTTTCGGGAGAACTTCCTGCTGGGTTTGGAGATATGCAACATCTTGTTGGATTCTCAATCTATCGAAACAGCTTCTCTGGGAAAATTCCAGAAAATTTTGGCCGATTTTCACCACTGGATAGCATTGATATATCGGAGAATCAATTTTCAGGTGATTTTCCAAAGTTCTTGTGTGAAAACAGAAAATTGAAATTTTTGCTTGCTTTGCAAAATAATTTCTCCGGTGAATTGCCTGAGACTTATGTTACATGTAAATCAGTGGAGAGATTCAGGGTGAGCAGGAATCGCTTGTCTGGAAAAATTCCAAATGAGCTGTGGGCACTTCCATTTGTGAAGATAATTGATTTGGCTGACAATAATTTTGATGGCTCTATATCTCCAAAAATTGGGCTTTCCTCTAGCTTAAGCCAGTTAGTTCTAACAAAGAACAAGTTTTCGGGTAAGCTTCCTGCACAACTTGGTAAGCTGATGAATTTGGAGAAGCTATATTTGAGCAACAACAATTTTCATGGTGAAATACCAGCCGAAATTGGAGCTCTTAAGCAATTGTCTTCTTTTCATCTAGAAGAGAATGTATTAACTGGATCAATACCTGCGGAACTTTGTAATTGTACAAGGCTAGTGGACTTGAATGTTGCTCGGAATTTTCTAACTGGCACTATCCCTCAGTCAGTTTCACTTATGAGCTCATTGAACTCTCTTAATCTATCTGGCAACAAACTTACAGGCTCAATCCCAGAAAGCTTAGTGTCAATGAAATTGAGCTCGATTGATTTTTCCAAAAACCAGTTGTCTGGGAGAATTCCAAACAATCTTCTAATCATTGGTGGTGATGAAGCTTTTGTTGGAAACCCAGCACTTTGTGTTGAACCAAATTCAAAAACTCTAGTGAATTCCGAATTCAACATTTGTACAAGCATACATGGTCAGAAAAGGGTCTTCGCTGATAAGGTAGTAATTCTTTGCGTCACTGCTTCTGTCTTGGTTGTAGTGTTGGCCGTGTTGCTTGTGAGTTACGGAAGCATCAAGCATGAAAAAGCAGACCTGGAGAAAAACTTGCAAGATCAAAAGGAAACAGATTCAAAATGGAAAATTGCTTCTTTCCACCAAGTTGATCTTGATGTGAATGAAATATGTAATTTGGATGAAGATAATTTGATTGACGGTGGTACTGGAAAGGTATATCGAGTTGACTTGAAGAAAAATGGTTCCACGGTGGCTGTAAAACAACTATGGAAAGGAGATAGCGTAAAAATTTTGGCGGCAGAGATGGAGACTTTGGGAAAAATCAGGCATAGAAATATACTTAAGCTTTATGCTTCTTTGTTCAAAGGAGGATCAAACTACTTGGTGTTAGAGTTCATGCCAAATGGTAATCTTTTTCAAGCTCTTCACCGACAGATGAAGGGTGGGAAACCAGAATTGGATTGGTACCAGAGATATAAAATTGCACTGGGCACTGCAAAAGGAATTGCCTATTTACATCATGATTGTTCTCCACCTATCATTCACAGAGACATAAAATCTAGTAACATTTTGCTGGATGAGGATTATGAGGCGAAAATTGCTGATTTTGGGGTTGCCAAATTTGCAGAAAAAACTGATCAACAGCTGGGTTTTAGCTGTCTTGCTGGCACTCATGGTTATATTGCTCCAGAGCTTGCTTACACACGCCAAGTTACTGAAAAGAGTGATGTGTATAGCTTTGGAGTGGTGTTGCTAGAATTACTTACAGGAAGGGAACCCATTGAGGAGGATTATGGAGAGGGGAAGGATATTGTATATTGGGCTATGACTAATCTGAATGCCCGTGAAAGCGCTATCAAGATCCTTGATGATAAAATAGCATCTGAGTCTGTTGAAGATGAAATGATTAAGGTCTTGAAGGTTGCTATCCAGTGCACAACTAAGCTCCCTTCTTTGCGTCCTTCTATGAGAGGTGTTGTCAAGATGCTTATTGATGCTTATTCTAGCCCTTTTCAATCTCCTGAAAGCGATTTTGAGAAAGATAAGGATTTTACCTAG 2847 0.4015 MYAVSVETEALLQFKKHLKDPLDSLASWTDSESPCEFHGVTCDRFSGKVVGISLENKSLSGEIFASIFALENLRVLSLASNFISGKLPFEVSNCSNLRVLNLTENDMVGIIPDLSVMRNLKVLDLSANYFSGEFPSWVGNLTGLVSLGLGENEYIESEVPETLGNLKNLTWLYLGGSHLRGEIPESVYEMKALETLDISRNMISGKLSQSIWKLENLRKIELFSNTLTGKIPAELANLTKLEEIDISMNHLYGELPEVIGTMENLVVFQLYENNFSGELPAGFGDMQHLVGFSIYRNSFSGKIPENFGRFSPLDSIDISENQFSGDFPKFLCENRKLKFLLALQNNFSGELPETYVTCKSVERFRVSRNRLSGKIPNELWALPFVKIIDLADNNFDGSISPKIGLSSSLSQLVLTKNKFSGKLPAQLGKLMNLEKLYLSNNNFHGEIPAEIGALKQLSSFHLEENVLTGSIPAELCNCTRLVDLNVARNFLTGTIPQSVSLMSSLNSLNLSGNKLTGSIPESLVSMKLSSIDFSKNQLSGRIPNNLLIIGGDEAFVGNPALCVEPNSKTLVNSEFNICTSIHGQKRVFADKVVILCVTASVLVVVLAVLLVSYGSIKHEKADLEKNLQDQKETDSKWKIASFHQVDLDVNEICNLDEDNLIGXGGTGKVYRVDLKKNGSTVAVKQLWKGDSVKILAAEMETLGKIRHRNILKLYASLFKGGSNYLVLEFMPNGNLFQALHRQMKGGKPELDWYQRYKIALGTAKGIAYLHHDCSPPIIHRDIKSSNILLDEDYEAKIADFGVAKFAEKTDQQLGFSCLAGTHGYIAPELAYTRQVTEKSDVYSFGVVLLELLTGREPIEEDYGEGKDIVYWAMTNLNARESAIKILDDKIASESVEDEMIKVLKVAIQCTTKLPSLRPSMRGVVKMLIDAYSSPFQSPESDFEKDKDFT 949
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4461g00001 949 Gene3D Phosphorylase Kinase; domain 1 654 733 - -
Pral4461g00001 949 ProSitePatterns Serine/Threonine protein kinases active-site signature. 777 789 IPR008271 GO:0004672|GO:0006468
Pral4461g00001 949 SUPERFAMILY L domain-like 255 544 - -
Pral4461g00001 949 SMART serkin_6 655 932 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4461g00001 949 CDD STKc_IRAK 661 927 - -
Pral4461g00001 949 Pfam Protein kinase domain 657 925 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4461g00001 949 PANTHER OS05G0588300 PROTEIN 210 333 - -
Pral4461g00001 949 ProSiteProfiles Protein kinase domain profile. 655 936 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4461g00001 949 Coils Coil 613 633 - -
Pral4461g00001 949 SMART LRR_typ_2 166 190 IPR003591 -
Pral4461g00001 949 SMART LRR_typ_2 70 94 IPR003591 -
Pral4461g00001 949 SMART LRR_typ_2 238 262 IPR003591 -
Pral4461g00001 949 SMART LRR_typ_2 430 454 IPR003591 -
Pral4461g00001 949 SMART LRR_typ_2 502 526 IPR003591 -
Pral4461g00001 949 SMART LRR_typ_2 117 141 IPR003591 -
Pral4461g00001 949 Pfam Leucine rich repeat 118 179 IPR001611 GO:0005515
Pral4461g00001 949 FunFam Probable inactive receptor kinase RLK902 4 162 - -
Pral4461g00001 949 SUPERFAMILY Protein kinase-like (PK-like) 651 927 IPR011009 -
Pral4461g00001 949 FunFam leucine-rich repeat receptor-like protein kinase TDR 730 938 - -
Pral4461g00001 949 ProSitePatterns Protein kinases ATP-binding region signature. 661 684 IPR017441 GO:0005524
Pral4461g00001 949 FunFam Receptor-like protein kinase HSL1 267 571 - -
Pral4461g00001 949 Pfam Leucine rich repeat N-terminal domain 7 43 IPR013210 -
Pral4461g00001 949 Gene3D Transferase(Phosphotransferase) domain 1 734 945 - -
Pral4461g00001 949 SUPERFAMILY L domain-like 31 350 - -
Pral4461g00001 949 Gene3D Ribonuclease Inhibitor 5 284 IPR032675 -
Pral4461g00001 949 FunFam Leucine-rich receptor-like protein kinase family protein 645 729 - -
Pral4461g00001 949 Gene3D Ribonuclease Inhibitor 287 572 IPR032675 -
Pral4461g00001 949 FunFam Leucine-rich repeat receptor protein kinase EMS1 183 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4461g00001 Pral-Chr4461 19415 23413 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4461g00001 5 930 Receptor kinase-like Gene Family AT1G72180 58.289 0.0 1073
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Pral4461g00001 Pkinase 1.2e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4461g00001 - - pcin:129322843 1662.51