Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4456g00010 ATGGGATTGCAAAACCAGCTAAACGACGTCGCTTCTGATTCGATTCCTCTGCTTTTCTTGGCTCTCGTCGCCGATTGCCTCCACCAGCTCCGCTCCTTCCTTATCACCCTCTTTCAATCGCTCGGACTTTCCAGATTCGACCCAAACCCAGTCGTTGTTGATGATGGATTTTTCGCCGCCGTCGGATCGGGCCTTGCCAGCTTAATCGTCCTTTCCGAGCAGCTCAATCTTAATCGCCGTGTATCTTACAGATACTCCATCGTAGGTGGCGGCGATGATGGTCCTGCCGGCGTTATTGGATCTCCCAAGTGTGTGGTGTGCCAGAGCTCGTTTGAAGATGGGGACCAAGTTCGACGGCTTCCGTGCCGTCATGTTTTTCACCGATGCTGCTTTGATGGCTGGCTGGACCACCTCAATTTTAACTGCCCTCTCTGTCGGACACCGCTGGTGTCCGACGAGCGCGTGACCCTTGCTGAGCGGCGCGTTGGTCCGGAGCTTGTTTCCTGGTTCTCTTGCCGATGA 522 0.5479 MGLQNQLNDVASDSIPLLFLALVADCLHQLRSFLITLFQSLGLSRFDPNPVVVDDGFFAAVGSGLASLIVLSEQLNLNRRVSYRYSIVGGGDDGPAGVIGSPKCVVCQSSFEDGDQVRRLPCRHVFHRCCFDGWLDHLNFNCPLCRTPLVSDERVTLAERRVGPELVSWFSCR 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4456g00010 173 Pfam Ring finger domain 103 146 IPR001841 -
Pral4456g00010 173 PANTHER RING ZINC FINGER PROTEIN-RELATED 76 157 - -
Pral4456g00010 173 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 96 155 IPR013083 -
Pral4456g00010 173 ProSiteProfiles Zinc finger RING-type profile. 104 146 IPR001841 -
Pral4456g00010 173 SMART ring_2 104 145 IPR001841 -
Pral4456g00010 173 SUPERFAMILY RING/U-box 103 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4456g00010 Pral-Chr4456 74934 75860 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4456g00010 1 171 C3H Transcription Factor Family AT1G15100 49.123 6.69e-46 146
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4456g00010 K16282 - qsa:O6P43_032678 241.506