Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4456g00003 ATGGAGGCGCCTCCTCCTCCTCCTCCGCTCACTGCGCCGCCCCTCTCCACTGTCGTCACGCCGACGATGCCTCCCTCTCACCTCAACTATGCTGATTCTGTTGATTCTTCTCCCCGTTCCCGCAACGCTGACTCCTGGGATGACCCTTTCCCTACTGCCGCTGCCTCCTCCAAGCTCCGCCTCATGTGCAGCTACGGCGGTCACATCGTCCCTCGCCCTCACGACAAGTCTCTGTGTTATGTCGGCGGCGATACTCGTATCGTCGTCGTTGACCGGAACACCTCTCTCTCCGACTTGTCTTCGCGCCTCTCTAAAACCTTCCTTGATGGCCGTCCCTTCACTTTCAAATACCAGCTTCCCAGTGAAGACCTCGATTCCTTAATCTCTGTCACTACTGATGAAGATTTTGATAATATGATCGATGAGTATGATCGAACTGCTTCGAATTCGTCGGTTAAGCCCTCCAGAATCCGCCTCTTCTTGTTCCCGACGATGCCTGAATCGTCGCAATCGATTGGGCCTTTACTTGATAATTCGGCTAAGTCGGATGACTGGTTCCTGAACGCGCTAAACGGCACAGGAGTGCTTAATAGAGGATTTTCTGAGTCCGATTCGGTAAATTGCTTGCTGGGTCTCGATGATGAGGCTGGTGGGAATAACCTGGACTCGGTTTCTAGGGAAAATGAAGTTGCTCAACCATCTGGATCTTTCGGGAATGGCAAGAATGTGACGAAGCAAGGACAGGATGTTCACTCTGTGCCTGATTCCCCTATGCTGGAAACGACCTCGTCTTTTGGGTCTACTTCTTCGTCACCTTCGCTGGCGAATCTTCCGCCGATTCGGGTTCATGTGGTGGATGATAGTAGTGTTAGGATGCAAGATCAGAAGGTGGTCGGAATTGAGGATCAGTTTGCTCAAATGGGTATTAGTGGAGGTGGTGGGCAGAGGCAAGATGAAGGGTTTGTGGTTCTGTCGTCTCCTCCTCCGATGCCGGCGACCATCACAACTCCGATGGTTGTGCCGATTAGCTCCGCTGTTGTTTCTGCCGGGGAATACCAGAATCGGGTTTTCTCCGACGATGAGAGATCAGACCACGGAGTGCCTGTGGGTTATAGAAAACCTACGGCACAGCAGTTACAACCACAGCCTCAGGCTCAGCCTCAGAATCTGCCTCCTCAATTTCAACAGAAGTCAGCCGGCGTTGTTGATTTGCCTTCCCCAGATTCGGTTTCAAGTGATGGTAGCATTTCAAATCCGTTGTCACGCCCAAGGCCTGTAATCTATCAAGAACCAGTTCAAATTCCTGCCGTGACTACAAGGGTTCCTAGTAATCCTGCTGATCCAGTAAAGCTTAATATGTCTGATCCTCAAACTCGGATCCAGATACAGCAACAGGTGCAGGACCCCGGATACGTATTGCAATCACAATTTGATCCGCAGCAACAACCTCAACAGCAGCAGAAGCAGCAATATATGGCCGATTCCCATTTCGTTCACCATGCTCCTGCTGGCGCTGTGCCAATCCCGGCATACTATCCTGTATATCCTTCCCAGCAACAATCTCATCCTCAGCATCACCCTCAGCTTGATCAGCAATACCCAGTTTACTACATGCCTGCAAGACAGGCCCAACCTTACAACTTACCGATGCAGCAGCAGCAGCAGCAGGCTAATATTGGTGAAGCCAACACAGCCATCCCTTCTAGTCGACCCCAAGCTCAGCCAAATCCGACGATGGCTCCATCATCTTTAGCTTACAATCCTGTAAGAAATGTTCCGATTCAGAAGGCTGAAATGGCTGCGGGCGCATACAGAACAAGTGCAGGCATCCCTCAATTAGTTCAAGTCCCTTCTACTCAGCCTCAGCATCAGCAACAATTTGTTGCTTACTCTCAGATTCATCATCCCTCTCAGACTGCTGCCCCCAATTCTGCTGTCCCAGCAAATTATGCTTATGACTATGCCAATCCTGCCCATGCTCAGTTATACTACACCCAACCTTTGGCTCCCACCATGCCTTCACAGTACCAAACCATGGCAGCTCCTGCTGTTGTGCTGCCAGAAGTTTCTTCTCAGCTTCCTTCTGACAGCATAAAGCAGCAGATAAGAACCTCACAGCCGATATAA 2127 0.5073 MEAPPPPPPLTAPPLSTVVTPTMPPSHLNYADSVDSSPRSRNADSWDDPFPTAAASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIVVVDRNTSLSDLSSRLSKTFLDGRPFTFKYQLPSEDLDSLISVTTDEDFDNMIDEYDRTASNSSVKPSRIRLFLFPTMPESSQSIGPLLDNSAKSDDWFLNALNGTGVLNRGFSESDSVNCLLGLDDEAGGNNLDSVSRENEVAQPSGSFGNGKNVTKQGQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVDDSSVRMQDQKVVGIEDQFAQMGISGGGGQRQDEGFVVLSSPPPMPATITTPMVVPISSAVVSAGEYQNRVFSDDERSDHGVPVGYRKPTAQQLQPQPQAQPQNLPPQFQQKSAGVVDLPSPDSVSSDGSISNPLSRPRPVIYQEPVQIPAVTTRVPSNPADPVKLNMSDPQTRIQIQQQVQDPGYVLQSQFDPQQQPQQQQKQQYMADSHFVHHAPAGAVPIPAYYPVYPSQQQSHPQHHPQLDQQYPVYYMPARQAQPYNLPMQQQQQQANIGEANTAIPSSRPQAQPNPTMAPSSLAYNPVRNVPIQKAEMAAGAYRTSAGIPQLVQVPSTQPQHQQQFVAYSQIHHPSQTAAPNSAVPANYAYDYANPAHAQLYYTQPLAPTMPSQYQTMAAPAVVLPEVSSQLPSDSIKQQIRTSQPI 708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4456g00003 708 PANTHER OS05G0427100 PROTEIN-RELATED 30 554 - -
Pral4456g00003 708 ProSiteProfiles PB1 domain profile. 58 164 IPR000270 GO:0005515
Pral4456g00003 708 FunFam Octicosapeptide/phox/Bem1p domain kinase superfamily protein 78 164 - -
Pral4456g00003 708 MobiDBLite consensus disorder prediction 1 20 - -
Pral4456g00003 708 MobiDBLite consensus disorder prediction 1 49 - -
Pral4456g00003 708 MobiDBLite consensus disorder prediction 21 40 - -
Pral4456g00003 708 MobiDBLite consensus disorder prediction 356 427 - -
Pral4456g00003 708 SUPERFAMILY CAD & PB1 domains 74 171 - -
Pral4456g00003 708 Pfam PB1 domain 74 163 IPR000270 GO:0005515
Pral4456g00003 708 Gene3D - 78 162 - -
Pral4456g00003 708 SMART PB1_new 73 164 IPR000270 GO:0005515
Pral4456g00003 708 MobiDBLite consensus disorder prediction 220 273 - -
Pral4456g00003 708 MobiDBLite consensus disorder prediction 375 402 - -
Pral4456g00003 708 CDD PB1_UP2 62 162 - -
Pral4456g00003 708 MobiDBLite consensus disorder prediction 221 273 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4456g00003 Pral-Chr4456 46049 48767 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4456g00003 58 195 MAP Kinase Kinase Kinase AT3G46920 39.286 1.46e-25 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4456g00003 - - qsa:O6P43_025756 839.336