Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4454g00010 ATGTCAACCTTGAAGATTTCAAAGCTGAGAGAGGTTGATGATTCTACTGATAGATGGAGGATTGTGGCTCGTGTCATTAGAAGATGGAATGTGTTTAACAAGGATGCTCCTGATGAGGTCTTCTGTATTTCAATGTTGCTGGTTGATGAGGAGGGAACAAGAATCCAAGCATCGGTCATGAACAAGAGTGTGTTTGATCTTTATGAAGACAGGCCTTTGGAGGGAAGGATCTACTTCATTGCTAATTTCTCTGTGTCAGCCAACTCAAAGGAGTATAGGGCTACCAACCATCCCTATAAGATTACCCTTGGTGCGCTGACATATATCCAGGAAAAAAATGCACCAATTCCTGAATATTCGTATAACTTTTTCCCTATAGCTGAAATCTTGGAGGTGGAACCAAAAAACAACATTGACTATCTGATTGATGTCATTGGCTTTGTCACCTCTATCAGTGCCCTGGAAGAATATCGCGTGAACCATGAAGTCAAGAATAGAGTGCGGCTGACTTTATCTGACAACTTGGAAAACTCAGTTTCATGTGTATTGTTTGATGAATGTGCAACTGAGGTCTGTATGACTGACTTTACAAGGCTGGAAGCTCCCATAGTAATCCTCATTCAGCTAGGGAGAATTGGATTTGATGAGGACGGGAAGCCCGAAGTCTGCAGCTCTTTTCATGCGACTAAGAGGAAGCTGATGCAAGAAACATATGGTTGTGACAGTGCAAAGACATTGCCTTCACCAACAATCAGCACGATCTCTGCAGGCGCTCCATCTCAGGCCGTGAATGCTTCTGAGAGAAGCTTGCTTGCTAATCATCCTTTGATTTCAATTTCTGAGATAGAAAATCGGGGTGTGGAGGACTTTTTCTTAATTAAGTGCACGGTGCTGAAGGTTGACACCAGGCATGGCTGGAATTACCTTGGGTGTGCTAGGTGTGGCAGTAAGTCCAAGACTGAATCCGGGAGGCTGAAGGTTCACTATACAGTTGCTGATGACTCAGGGAAGGCCACGGTGGTCTTCTTTGACAAGCTGGCCTTTCAATTTCTGGGAAAAACTGCTAATGAGATGAAGTTGCAGCTAGAGAAAGAAGATCGAGGGTACGATTTTCCAGATGAATTGGACTGTTTGGTAGGGAAGAGGCTGCTATTGAAGATTAAGCTTAACAAGTACAACATAGACTTCCCACACTCTAGCATCTCAGTCTCTGCATATACTGAGATTGTTAATTTGATGGAGGACTTTAATAGGGCTGGGGAGACAACTGAGGAAGTTCCTGAAGAGGAATCCAATTATGTTCATGTGGAAGAAGAGACCCCTGAGGATAGTGGTGTTGCTGATTCACAACCAGTCAATGATGAGCAGAAGGGGGACGATACTGAAGTGCTTGATGTCATGCCCATATCGCAGGCCTACCCTATCGCAACTTATAAAGGGAAGAGAAAGGTTACAGCAAGAAAGAGTGCTGGGTTAAAGAGGAAATCACTGGAGGAGCTGAAGGACCCTCAGGAGAACGTTGAATGGAGGCCTGTTAAGATCATTAAACAGGAGAAGCCTTGA 1563 0.4415 MSTLKISKLREVDDSTDRWRIVARVIRRWNVFNKDAPDEVFCISMLLVDEEGTRIQASVMNKSVFDLYEDRPLEGRIYFIANFSVSANSKEYRATNHPYKITLGALTYIQEKNAPIPEYSYNFFPIAEILEVEPKNNIDYLIDVIGFVTSISALEEYRVNHEVKNRVRLTLSDNLENSVSCVLFDECATEVCMTDFTRLEAPIVILIQLGRIGFDEDGKPEVCSSFHATKRKLMQETYGCDSAKTLPSPTISTISAGAPSQAVNASERSLLANHPLISISEIENRGVEDFFLIKCTVLKVDTRHGWNYLGCARCGSKSKTESGRLKVHYTVADDSGKATVVFFDKLAFQFLGKTANEMKLQLEKEDRGYDFPDELDCLVGKRLLLKIKLNKYNIDFPHSSISVSAYTEIVNLMEDFNRAGETTEEVPEEESNYVHVEEETPEDSGVADSQPVNDEQKGDDTEVLDVMPISQAYPIATYKGKRKVTARKSAGLKRKSLEELKDPQENVEWRPVKIIKQEKP 520
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4454g00010 520 Gene3D - 260 418 IPR012340 -
Pral4454g00010 520 PANTHER OS03G0429900 PROTEIN 291 438 IPR004591 GO:0003677|GO:0005634|GO:0006260|GO:0006281|GO:0006310
Pral4454g00010 520 MobiDBLite consensus disorder prediction 420 442 - -
Pral4454g00010 520 MobiDBLite consensus disorder prediction 420 463 - -
Pral4454g00010 520 Gene3D - 3 111 IPR012340 -
Pral4454g00010 520 Gene3D - 115 243 IPR012340 -
Pral4454g00010 520 Pfam Domain of unknown function DUF223 45 137 IPR003871 -
Pral4454g00010 520 CDD RPA1_DBD_A_like 20 101 - -
Pral4454g00010 520 SUPERFAMILY Nucleic acid-binding proteins 275 394 IPR012340 -
Pral4454g00010 520 MobiDBLite consensus disorder prediction 480 504 - -
Pral4454g00010 520 SUPERFAMILY Nucleic acid-binding proteins 120 214 IPR012340 -
Pral4454g00010 520 SUPERFAMILY Nucleic acid-binding proteins 4 111 IPR012340 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4454g00010 Pral-Chr4454 110881 113537 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4454g00010 3 393 Core DNA Replication Machinery Family AT5G08020 24.709 3.28e-17 82.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4454g00010 - - pcin:129290097 399.053