Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4454g00003 ATGAACCCAATGGTTCTCTTCGTCATCCTCCTCTTCTGTGTTCTAGTCAGAACCACCCTCTGTTATGTGAATCCCCACTTCCAAGCTTGCGAGCCCCAAACCTGTGGGAACGGCCCAAACATAACCTACCCTTTCCATATCAATGGTAAACAAGAGAGCTTCTGCGGGTTCCCTGGTTTCGGCCTTTTCTGTGCTTCCAATGGCTTCCCAACGCTGAATCGCTCCAATACTTTCTACATAGTCGATGAAATTTCCTACCACAATCTCTCTCTCCATGTCTTCAATCCTAAATTCCGAATCTCCAATTCCACCAAATGTCTCTCTCCCTCCGACAACCTCACTCTCGGCTTCAGGTACACTGTGGCTCCGAACCAGAAGGAGCTGCTGCTGTTCTTCGATTGCGACTTGCCGTCACTGCCGCAGGCGATGAAACAAAACGTATTGGGGTGTTCTGAAGGGAACAGAACGAGGTCGGTGCTGGGCATGGCGGTGGATGACGCAGCTGAGAAGTTGAAGTATGCGAAGGATAATTGCAGGGATGGGCCGACGACGAGGACGGTGGTGGAGAATGTGGAAGGAGGGATAAGAGAGGCTCTGGGAAGAGGATTGTTGTTGAAGCTACAGAATTGGACGGCGAGTAAGTGCGAGAAATGCCGGAGCAGTGGAGGGAGGTGTGGCTTCCTCGACGGTGATGCGTATGACTTCAAGTGCTTCTGCCGCGACCGCGACCATCGTCGCCGATGTCGTCATGAAAAAGCGACTTTGAAGCTGGGACTGGCATTAGGTTTAGGGATTGGAGTCCCAGGGATGATAACAATGGGGATGATTGCGTGGTGGTGGTGGAGGAGGAGAAAATATGGCGATTCGGATTCAATAAGCAGATACGCCACTCATTCTCACATAGACGGTAGCAATGTCTACTTCGGAATCCCTGTTTTCTCCTATTCCGAGCTCGAAGCAGCCACCGACCATTTCGATCCTTCCACAGAGCTCGGAGATGGAGGCTTTGGCACTGTTTATTACGGTAAGCTTGAAGACGGGCGAGAAGTTGCTGTAAAACGCTTATACGAGCAAAACTACAAACAAGTAGAACAGTTCATGAATGAAGTGAGGATCCTCACTCGTTTACACCACAAAAACCTTGTCACCCTCTATGGCTGCACCTCCCGCCGCAGCCGGGAACTCCTCCTCGTCTACGAGTTCATCCCAAACCGCACCGTCGCTCATCACCTCCACCTCCACAGAGATCCCAAAAAGCCCACCGCTTTACCATGGTCCACTCGCATGAAAATCGCTGTCCAAACCGCCAGAGCATTGGTCTACCTCCATGCCTCTGACATCATTCACCGCGACATCAAAACCAACAACATTCTCCTTGACGAAGGATTCAATGTTAAGGTTGCCGATTTTGGACTCTCAAGGTTGTTCCCCAACAATGTCACTCACGTTTCCACTGCTCCACAAGGGACGCCGGGTTATCTCGATCCCGAATATCATAGTTGCTATCAGCTTACCAGCAAAAGTGATGTTTATAGCTTCGGAGTTGTGCTCATCGAGCTCATAACATCCATGGAGGCGGTCGACATGAGCCGGGACTCGGACTCCATAAACTTGTCGAGCTTAGCAGTGAGGAAGATTCAGAGGAGTGAGCTGAGCGAGCTGGTGGATCCTTCTCTTGGGTTTGAGCGTGATGGGGAGGTGAAGAGGATGGTAATATTGGTGGCTCAGGTGGCTTTTCAGTGTTTACAGACTAATAAGGAACTGAGACCTTCCATGGAGGAAGTTCTGGAGATGTTGGAGAGGATTCAAAGTGGGAGTGATCGGGTACAGGAGCACCCACGATTGCCACCGGAATCACCCAAATGGGATGAGGTGAGGTTGTTGAAGAACGCAAATCCACCGCCTTATTCTCCCAACAGTGTTGTTGATAAATGGGCAAGCGAAGCTACGACGCCCTATGTCAGTGCTTGA 1971 0.5063 MNPMVLFVILLFCVLVRTTLCYVNPHFQACEPQTCGNGPNITYPFHINGKQESFCGFPGFGLFCASNGFPTLNRSNTFYIVDEISYHNLSLHVFNPKFRISNSTKCLSPSDNLTLGFRYTVAPNQKELLLFFDCDLPSLPQAMKQNVLGCSEGNRTRSVLGMAVDDAAEKLKYAKDNCRDGPTTRTVVENVEGGIREALGRGLLLKLQNWTASKCEKCRSSGGRCGFLDGDAYDFKCFCRDRDHRRRCRHEKATLKLGLALGLGIGVPGMITMGMIAWWWWRRRKYGDSDSISRYATHSHIDGSNVYFGIPVFSYSELEAATDHFDPSTELGDGGFGTVYYGKLEDGREVAVKRLYEQNYKQVEQFMNEVRILTRLHHKNLVTLYGCTSRRSRELLLVYEFIPNRTVAHHLHLHRDPKKPTALPWSTRMKIAVQTARALVYLHASDIIHRDIKTNNILLDEGFNVKVADFGLSRLFPNNVTHVSTAPQGTPGYLDPEYHSCYQLTSKSDVYSFGVVLIELITSMEAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLGFERDGEVKRMVILVAQVAFQCLQTNKELRPSMEEVLEMLERIQSGSDRVQEHPRLPPESPKWDEVRLLKNANPPPYSPNSVVDKWASEATTPYVSA 656
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4454g00003 656 FunFam Wall-associated receptor kinase-like 20 402 612 - -
Pral4454g00003 656 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 5 647 IPR044652 GO:0004672
Pral4454g00003 656 ProSiteProfiles Protein kinase domain profile. 325 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4454g00003 656 Gene3D Transferase(Phosphotransferase) domain 1 403 612 - -
Pral4454g00003 656 ProSitePatterns Protein kinases ATP-binding region signature. 331 353 IPR017441 GO:0005524
Pral4454g00003 656 Pfam Wall-associated receptor kinase C-terminal 154 241 IPR032872 -
Pral4454g00003 656 SUPERFAMILY Protein kinase-like (PK-like) 310 636 IPR011009 -
Pral4454g00003 656 CDD STKc_IRAK 331 602 - -
Pral4454g00003 656 Pfam Protein kinase domain 328 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4454g00003 656 SMART serkin_6 325 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4454g00003 656 Gene3D Phosphorylase Kinase; domain 1 299 401 - -
Pral4454g00003 656 ProSitePatterns Serine/Threonine protein kinases active-site signature. 447 459 IPR008271 GO:0004672|GO:0006468
Pral4454g00003 656 Pfam Wall-associated receptor kinase galacturonan-binding 30 93 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4454g00003 Pral-Chr4454 26114 33587 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4454g00003 29 656 Receptor kinase-like Gene Family AT1G25390 44.930 7.50e-160 472
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4454g00003 Pkinase 9.6e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4454g00003 - - aip:107643858 721.079