Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4454g00001 ATGTCAGATCAGAGCCCAAGACTTTCATTCACAGGTCATACCCCCCGCTACCATCACCATGATTTCCCTTTTGCCCATCTTCTTCATCTTTATCGTTCCCTCGTCACTCTTCTTCTTCGCCCTCCTCCTCCTTCATTCCCTCTCAATATTCCCAAATCCCTAATGAACCCAACGGTTCTCTTCTTCATCCTCTTCTTCTCTGTTCTAACCAGAACCACCCTCTGTTATGTGAATCCCAACTTCCAAGCTTGCGAGCCCCAAACCTGTGGGAACGGCCCAAGTATAATCTACCCCTTCCGTATCAAAGATAAACAAGATAGCTTCTGCGGGTTCCCTGGTTTCGACCTTCTCTGTGCTTCCAATGGCTTCCCAGCGCTCAATCTCTCCAATACTTTCTACATAGTCGATGAAATTTCCTACCCCAATCTCTCTCTCCGAGTCTTCAATCCAAACTTCCGAATCTCCAATTTCACCACATGTCTCTCTCCCTCCGACAACCTCACTCTCGACTTCAGATACGCTGTGGCTCCGAACCAGAAGGAGGTGCTTCTGTTCTTCGATTGCGACTTGCCGTCGCTGCCGGAGGAGATGAAACAAAACGTATTGGGGTGTTCTGAGGGGAACAGAGCGAGGTCGGTGCTGGGCATGGCGGTGGATGACGCAGCTAAGAAGTTGAAGTATGCGAAGGATAATTGCAGGGGTGGGCCGACGACGAGGACGGTGGTGGGCAATGTGGAAGGAGGGATAAGAGAGGCTCTGGGAAGAGGATTGTTGTTGAAGCCAACGAATTGGACGGCGAGTAAGTGCGAGGCATGCCAGAGCAGTGGAGGAAGGTGTGGCTTCCTCTACAGAGATGCGTTTGACTTCAAGTGCTTCTGCCGCGACGGCGACCATTTTCGCAGTTGTCGTCATGACAAAGGGACTTTGACGCTGGGACTGGCATTAGGTTTAGGGATTGGAGTCCCAGGGATGATAACAATGGGGATGATTGTGTGGTGGTGGTGGAGGAGAAGAAAATATGGCGATTCGGATTCAATAAGCAGATACTCCACTCATTCTCACATAGACAGTAGCAATGTCTACTTCGGAATCCCTGTTTTCTCTTATTCCGAGCTCGAAGCAGCCACCAACCATTTCGACCCTTCCACAGAGCTCGGAGATGGAGGCTTCGGCACTGTTTATTACGGTAAGCTTGAAGACGGACGAGAAGTTGCTGTAAAACGCTTATACGAGCAAAATTACAAACAAGTAGAACAGTTCATGAATGAAGTGAGGATCCTCACTCGTTTACACCACAAAAACCTTGTCACCCTCTATGGCTGCACCTCCCGCCGCAGCCGGGAACTCCTCCTCGTCTACGAGTTCATCCCAAACCGCACCGTCGCTCATCACCTCCACCTCCACAGAGATCCCAAAAAGCCCACAGTTTTACCATGGTCCACTCGCATGAAAATCGCTGTCCAAACCGCCAGAGCATTGGTCTACCTCCATGCCTCTGAAATCATTCACCGCGACATCAAAACCAACAACATTCTCCTTGACGAAGGATTCAATGTTAAGGTTGCAGATTTTGGACTCTCAAGGTTGTTCCCCAACAATGTCACTCACGTTTCCACTGCTCCACAAGGGACGCCGGGTTATCTCGATCCCGAATATCATAGTTGCTATCAGCTCACCAGCAAAAGTGATGTTTATAGCTTCGGAGTTGTGCTCATCGAGCTCATAACATCCATGGAGGCGGTCGACATGAGCCGAGACTCGGACTCCATAAACTTGTCGAGCTTAGCAGTGAGGAAGATTCAGAGGAGTGAGCTGAGCGAGCTGGTGGATCCTTCTCTTCGGTTTGAGAGTGATGGGGAGGTGAAGAGGATGGTGATATTGGTGGCTCAGTTGGCGTTTCAGTGTTTACAGACTAATAAGGAATTGAGACCTTCCATGGAGGAAGTTCTGGAGATGTTGGAGGGGATTCAAAGTGGGAGTGATCGGGTACAGGAGCACCCACGATTGCCACCGGAATCACCCAAATGGGATGAGCTTGGCTTGTTGAAGAACGCAAATCCACCGCCTTATTCTCCCAACAGTGTTGCTGATAAATGGGTAAGCGAAACTACGACGCCCAATGTCAGTGCTTGA 2133 0.4984 MSDQSPRLSFTGHTPRYHHHDFPFAHLLHLYRSLVTLLLRPPPPSFPLNIPKSLMNPTVLFFILFFSVLTRTTLCYVNPNFQACEPQTCGNGPSIIYPFRIKDKQDSFCGFPGFDLLCASNGFPALNLSNTFYIVDEISYPNLSLRVFNPNFRISNFTTCLSPSDNLTLDFRYAVAPNQKEVLLFFDCDLPSLPEEMKQNVLGCSEGNRARSVLGMAVDDAAKKLKYAKDNCRGGPTTRTVVGNVEGGIREALGRGLLLKPTNWTASKCEACQSSGGRCGFLYRDAFDFKCFCRDGDHFRSCRHDKGTLTLGLALGLGIGVPGMITMGMIVWWWWRRRKYGDSDSISRYSTHSHIDSSNVYFGIPVFSYSELEAATNHFDPSTELGDGGFGTVYYGKLEDGREVAVKRLYEQNYKQVEQFMNEVRILTRLHHKNLVTLYGCTSRRSRELLLVYEFIPNRTVAHHLHLHRDPKKPTVLPWSTRMKIAVQTARALVYLHASEIIHRDIKTNNILLDEGFNVKVADFGLSRLFPNNVTHVSTAPQGTPGYLDPEYHSCYQLTSKSDVYSFGVVLIELITSMEAVDMSRDSDSINLSSLAVRKIQRSELSELVDPSLRFESDGEVKRMVILVAQLAFQCLQTNKELRPSMEEVLEMLEGIQSGSDRVQEHPRLPPESPKWDELGLLKNANPPPYSPNSVADKWVSETTTPNVSA 710
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4454g00001 710 SUPERFAMILY Protein kinase-like (PK-like) 359 678 IPR011009 -
Pral4454g00001 710 Pfam Wall-associated receptor kinase C-terminal 244 296 IPR032872 -
Pral4454g00001 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 501 513 IPR008271 GO:0004672|GO:0006468
Pral4454g00001 710 Pfam Protein kinase domain 382 651 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4454g00001 710 CDD STKc_IRAK 385 656 - -
Pral4454g00001 710 MobiDBLite consensus disorder prediction 659 710 - -
Pral4454g00001 710 FunFam Wall-associated receptor kinase-like 20 456 666 - -
Pral4454g00001 710 Gene3D Phosphorylase Kinase; domain 1 350 455 - -
Pral4454g00001 710 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 59 704 IPR044652 GO:0004672
Pral4454g00001 710 Gene3D Transferase(Phosphotransferase) domain 1 457 666 - -
Pral4454g00001 710 MobiDBLite consensus disorder prediction 687 710 - -
Pral4454g00001 710 ProSitePatterns Protein kinases ATP-binding region signature. 385 407 IPR017441 GO:0005524
Pral4454g00001 710 SMART serkin_6 379 653 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4454g00001 710 ProSiteProfiles Protein kinase domain profile. 379 669 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4454g00001 710 Pfam Wall-associated receptor kinase galacturonan-binding 84 147 IPR025287 GO:0030247
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4454g00001 Pral-Chr4454 8111 23560 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4454g00001 269 710 Receptor kinase-like Gene Family AT1G25390 54.222 3.40e-158 469
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4454g00001 Pkinase 1.3e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4454g00001 - - aip:107643858 730.324