Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4453g00002 ATGGCTGTGATGATCCAAGTTCAAACAATTATTGATCTGGACAAGAATAACGGAAGGAAGAAGCTGCGGCTTCTAAACGTCTCCCAGAAGAACATCATCACAGTCTCGGACGAAGATCTAGACAAGATTCTGAAATCCAAAGTCACTGTGACCATGTGCATCGTCCCGCTGGTTTTTCCAAACATGTCTGTTCTGACTTTGATGTCTACTGGGAAGACTCATCCAGTCAAATTGTTATCCAAGTACGATTGTCTCATGATTGTGATAAGTGTCACAACCACTTGGGAGGCCAGTGTCTTCTTGATGCCAACGACAAGTTTTACTGCAAATATGAAAGTTACAGAGCCTACTTGGGTCCTCTTCTCTTACGCCGAACTTGAGAAAGCCACAAATAACTTTGATCATTCAAGAGAACTTGGAACTAGAGGTTTTGACATTGTTTGCCATGAGCAGTTCATAAATGAAGTCAAGATTCTGACTCACCTATGCCATCGCAACCCTGTGTCTCTTTATGGTTGTTCTTCATGTCACTGTCACGAACTTCTTCTTGTCTACGAATACATTCCAAATGGCACTGTTTACTGTCATCTTCATGGTGTGCTAGCCAATCGTGGTCTCCTGCCATGGCTTATAAGAATCAAAATAGCCATAGAAACTGCCACTGCTTTGGCTTACCTTCATGCTTCAGACATTATCCATTGTGATGTCAAAACCAACAACATCCTCCTAGAAAATAACTTTTGTGTTAAGGTTGTAGATTTTGGTCTTTCAAGGTTGTTTCCCAATGCTGTCACGCATGTTTCCACTGCTTCACAAGGGAAACCCAGGTTATATATTATGTGGGATAAAGGTGAGATAAACTTGGCAAATATTGTGGGGAAGAAGATTCAAGAGGGTGCATTTGGGGAGCTAGTTCATCCTTTGCTAAGATTTGAGTCAGATAGCGAGGTTAGGAGGATGATACTTACAGTGGCAGAGTTGGCTTTTCAGTGTTTACAGAGGGACAAAGACTTGAAACCTTCTATGGATGAGGTTTTGAACTTTTTAAAGAGAATTGAGAGAGGAAATGAGAAGATTGATCACGTAGATGACGTAGATATTCATGACGCTATTGGGATTCCACACAGTAGTTATGCTGCACATTCTTCATCACCATACCATCTTGCCAGATTGTGA 1176 0.4141 MAVMIQVQTIIDLDKNNGRKKLRLLNVSQKNIITVSDEDLDKILKSKVTVTMCIVPLVFPNMSVLTLMSTGKTHPVKLLSKYDCLMIVISVTTTWEASVFLMPTTSFTANMKVTEPTWVLFSYAELEKATNNFDHSRELGTRGFDIVCHEQFINEVKILTHLCHRNPVSLYGCSSCHCHELLLVYEYIPNGTVYCHLHGVLANRGLLPWLIRIKIAIETATALAYLHASDIIHCDVKTNNILLENNFCVKVVDFGLSRLFPNAVTHVSTASQGKPRLYIMWDKGEINLANIVGKKIQEGAFGELVHPLLRFESDSEVRRMILTVAELAFQCLQRDKDLKPSMDEVLNFLKRIERGNEKIDHVDDVDIHDAIGIPHSSYAAHSSSPYHLARL 391
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4453g00002 391 ProSitePatterns Serine/Threonine protein kinases active-site signature. 231 243 IPR008271 GO:0004672|GO:0006468
Pral4453g00002 391 ProSiteProfiles Protein kinase domain profile. 62 391 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4453g00002 391 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 283 366 IPR044652 GO:0004672
Pral4453g00002 391 Gene3D Transferase(Phosphotransferase) domain 1 279 371 - -
Pral4453g00002 391 Gene3D Transferase(Phosphotransferase) domain 1 113 278 - -
Pral4453g00002 391 Pfam Protein tyrosine and serine/threonine kinase 149 269 IPR001245 GO:0004672|GO:0006468
Pral4453g00002 391 SMART serkin_6 133 349 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4453g00002 391 SUPERFAMILY Protein kinase-like (PK-like) 117 355 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4453g00002 Pral-Chr4453 20549 23015 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4453g00002 120 377 Receptor kinase-like Gene Family AT1G25390 45.397 2.31e-72 236
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4453g00002 PK_Tyr_Ser-Thr 1.1e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4453g00002 - - pop:18099455 276.174