Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4453g00001 ATGGCTTCAGTTTATGTGTTTCGTTTCGTCCAGTTTTTTCACTTTGTACTTGTTCTTTCAGCTGTGTATGGAAATGGGAAGCATGACGATGAGTGTCCTCCATCGTTTGATTGTGGAAATCTTGGGAGCCTCCACTTCCCTTTCACCAAGCATGAACAGAAGCACTGTGGCCTCTTCGCAGTACGTGGCTGTGATGGTCCATCTCTGAATAAAACGATTCAACTGCAGAAGAATGGAAGACCATTACCGCTTACTAATGTTGTTCAGCAGGAGAAACTCATCATCACAGTTTTTGACCCAGATCGTCATAGAACCTGCGATGTAGCTTCCAACAGTAACATGCTTCTTCCTCAAAATTCTCCCTTGGCTTCCTTTCGTTTCAAACACAACGTCGCAAGCCTGTTCAGATGCAGACACTACCCTCACATTAGACCCCCTCCTGGTTTCATCAATCATGCCTGTCCTGACTTCGATGTCTTTTGTCACGACTTATCACCACACACGCCTCCTCCTGGTCCTCCTAATCTTGACCAGATGCAAACCTATTTACCTGATTGCTCCGTTCTTCCCCTTCCTTGTAAGAACCTGACTTATGCCTCAGATTTTTCATCATTCTTTTGCGGTGAAGTAGATATTGAAGTGCACGCATCTGGTGATTGTGATGAGTGTTACAACCACAAGGGAGGCCAATGTCAAGTTGATGACCACAATACCTTCTACTGCGACGTGGGCCCCATAGGAAACCGGAAGTCGTTGGTCATACCTGCTACAGTTGTTGCAGCTACAATACTAGGAGTTTTTGTACTTACAATGTATTGGCTTAAAAGTACATTATTTCTTGATAAGATCACTACATTCTGGAAGAACAAATCGAAAACTCATCCAGAGTTTGAGGCTTTATTTATGAAGAGCCATGGATCACTTGCCACAAAAAGATATAGCTACTCGGAGATAAAAAAAATGACCAGCTGTTTCAAAGAAAACTTAGGGCAAGGAGGCTATGGAACTGTGTTCAAAGGGCAGTTACATGACCAATGTCCAGTTGCAGTGAAGGTTTTGAATGAAACAAAAGGTAATGGAGAGGAATTCATTAATGAGGTAGCAAGTATAAGCAAGACTTCCCATGTCAACATTGTCACACTTTTAGGATTTTGTTTTGAAGGGTCAAAGAAGGCACTTGTTTATGAGTTTATGGCTAATGGATCATTAGAGAAGTTCATCTTTGAAAATAAAGAAAACCTGCTTGATGTTAATCTCCAGTTGAGTTGTGAAATATTGCACCAAATTGCAGTGGGTGTTGCACGAGGATTAGAGTATTTGCATAGAGGATGTAACACTCGGATATTACATTTTGACATAAAACCTCATAACATTTTGTTGGATGAAAACTTTTGTCCAAAAATCTCAGATTTCGGACTAGCCAAAATATGCCCAAGAAATGAGAGTTTTATATCCATGACGGGCGCTAGAGGAACCATAGGATATATTGCTCCTGAGGTAATTTCTAGAAATTTTGGTGTAGTCTCTCATAAGTCAGATGTTTATAGTTTTGGGATGATGATTCTTGAAATGGTTGGAGGAAGAAGGAATGTCAACATCAATGTTGATAATAGTAGTGAAATATATTTTCCTCATTGGATTTACAAGCATCTAGAATTGAATGAAGAGCTTGCACTAAGGAGCATTAGAAATGAAAGTGACACAGAGAGCATAAGACAGATGGTGATAACCAGCTTATGGTGCATACAAACTAACCCTTTAGATCGTCCAGTGATGAGTAAAGTGGTGGAGATGCTTGAAGGCAGAGTTGAGACCTTGCAAATTCCACCAAAGCCTTACTTATCATCTCCTTCAACATCACCACGCTCTTCGTCTTCCTTAACTCACTGA 1890 0.4074 MASVYVFRFVQFFHFVLVLSAVYGNGKHDDECPPSFDCGNLGSLHFPFTKHEQKHCGLFAVRGCDGPSLNKTIQLQKNGRPLPLTNVVQQEKLIITVFDPDRHRTCDVASNSNMLLPQNSPLASFRFKHNVASLFRCRHYPHIRPPPGFINHACPDFDVFCHDLSPHTPPPGPPNLDQMQTYLPDCSVLPLPCKNLTYASDFSSFFCGEVDIEVHASGDCDECYNHKGGQCQVDDHNTFYCDVGPIGNRKSLVIPATVVAATILGVFVLTMYWLKSTLFLDKITTFWKNKSKTHPEFEALFMKSHGSLATKRYSYSEIKKMTSCFKENLGQGGYGTVFKGQLHDQCPVAVKVLNETKGNGEEFINEVASISKTSHVNIVTLLGFCFEGSKKALVYEFMANGSLEKFIFENKENLLDVNLQLSCEILHQIAVGVARGLEYLHRGCNTRILHFDIKPHNILLDENFCPKISDFGLAKICPRNESFISMTGARGTIGYIAPEVISRNFGVVSHKSDVYSFGMMILEMVGGRRNVNINVDNSSEIYFPHWIYKHLELNEELALRSIRNESDTESIRQMVITSLWCIQTNPLDRPVMSKVVEMLEGRVETLQIPPKPYLSSPSTSPRSSSSLTH 629
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4453g00001 629 MobiDBLite consensus disorder prediction 611 629 - -
Pral4453g00001 629 FunFam S-receptor-like serine/threonine-protein kinase 290 397 - -
Pral4453g00001 629 FunFam PR5-like receptor kinase 398 611 - -
Pral4453g00001 629 ProSitePatterns Serine/Threonine protein kinases active-site signature. 448 460 IPR008271 GO:0004672|GO:0006468
Pral4453g00001 629 Gene3D Transferase(Phosphotransferase) domain 1 398 614 - -
Pral4453g00001 629 SMART serkin_6 323 599 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4453g00001 629 PANTHER RUST RESISTANCE KINASE LR10-RELATED 296 618 IPR045874 GO:0004672
Pral4453g00001 629 MobiDBLite consensus disorder prediction 610 629 - -
Pral4453g00001 629 Gene3D Phosphorylase Kinase; domain 1 300 397 - -
Pral4453g00001 629 CDD STKc_IRAK 329 601 - -
Pral4453g00001 629 SUPERFAMILY Protein kinase-like (PK-like) 307 600 IPR011009 -
Pral4453g00001 629 Pfam Protein tyrosine and serine/threonine kinase 325 599 IPR001245 GO:0004672|GO:0006468
Pral4453g00001 629 ProSiteProfiles Protein kinase domain profile. 323 614 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4453g00001 629 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4453g00001 Pral-Chr4453 13687 17521 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4453g00001 9 612 Receptor kinase-like Gene Family AT5G38260 37.400 9.95e-121 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Pral4453g00001 PK_Tyr_Ser-Thr 9e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4453g00001 - - pcin:129284583 700.279