Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4451g00060 ATGGATGTTCAAGTAATAAATGTAGAAGAAGGGACTGGTCACCGAGCTATGACTGATGATGGGGATGCTGAACCTAGTGAAGGCGAAGTTAATAATGCTGAAAACTCAGGATCTCATGTTGAGGATGGAATTTCTGAGCCATTTGTTGGTATGGAGTTTGATTCTGAAGACGCTGTGAGGACTTTCTACAATGAGTATGCCAAAAGGGTGGGTTTCACCACTAAAGTTGGTCAGCATGGCCGTTCTAAAGTTGATGGGACAATCATGTATCGGGAGTATGTCTGTGGCAAGGAAGGCTTAAAAAGAAGGTTAGGTGACAGTTGTGATGCAATGATTAAAGTAGAGTTAAAAGGTCAAAATAAATGGGTCATAACAAAATTTGTGAAGGAGCATAGCCATTCCATGGGGAATCCCAGTAAGGTGCATCACCTTCGGCCACGTAAGCATTTTTCTAGTGTTGGAAAGACCATGCCTGAAACTTACCAAGGAGTGGGACTTGTTCCAAGTGGTGTCATGTATGTGTCCATGGATGGCAATCGTGTTTCTAGTGAGAATATTCGTGAAGCTAAGAACACTCCTCTTGAACCAAGTCATGCAGCAAGGAATTCTGCAATGATGAATAATACTGGTAGGCCTCCTATTCGGAGGAGGACATTAGGGAGAGATGCTCAGAACCTGCTGGAGTATTTTAAGAAAATGCAGGCTGAGAATCCTGGTTTCTTCTATGCTATACAACTTGATGAAGAAAATCATATGTCGAATGTATTTTGGGCGGATGCAAGATCAAGGATGGCGTACAGTTATTTTGGTGATGCAGTGACGCTGGACACAACATACAAAGTGAATCAATACAGAGTTCCTTTTGTCCCATTTACTGGGGTGAACCATCATGGTCAAACAATTTTGTTTGGTTGCGCACTTCTTTTGGATGATTCTGAGGCTTCTTTCTTATGGCTCTTTAAGACATTTTTGACAGCAATGAATGATCGCCAACCTGTCTCTATAATTACAGATCAAAACAAAGCCACCCAGACAGCAGTTTCTCAAGTTTTTCCTCAAGCACGCCACTGTATAAGTAAGTGGCATGTCCTCAGAGAAGGCCAGGAAAAGTTGGCGCATGTTTGTCTTGCTCACCGGAACTTTCAGGTTGAACTTTATAATTGTATTAACCTAACAGAGACCATTGAGGAATTTGAGTCGTCTTGGAGTTCTATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCATTCATTATATGATGCTCGTGCTCAGTGGGTTCCGGCATATTTTCATGATTCATTTTTCGCTGCAATATCTCCTAGTAGAGGATTTGACAGTTCTTTTTTTGACGGTTATGTCAACCAGCAGACAACATTACCAATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGCTTGAGAAGGAAATAGAAGCAGATTTTGAAACTATATGCACCACACCAGTTTTGAGGACACCTTCACCCATGGAAAAACAGGCTGCGAGTCTTTATACAAGAAAAATATTTTCTCTGTTTCAGGAAGAGCTTGTTGAAACATTTGTGTATACTGCCAATAGAATTGAAGGTGATGAGGTAAATAGCACATTCAGGGTTGCAAAATTTGAAGATGATCAAAAGGCATATGTTGTCACATTAAACCATTCGGAGCTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATCCTTTGCAGGCATGTCTTAACCGTTTTCACAGTGACCAATGTACTTACATTACCACCCCATTACATCTTAAGACGGTGGACAAGGAATGCAAAATCTGGTGTTGGATCAGATGAACGTGCTGGTGAATTACATGGACAGGAGTCTCTAACATCACGGTATAGCAATCTATGTAGGGAAGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCTTTGAGTGCCCTTAAAGAAGCTGGCAAGAAGATCGCTGCTGTGAAGAAAAGTGTTTCCAAAGTTGCTCCTCCTAGCAATCAGACTGGCGGGACTGCCTATGATGACAAAAAAACTTCTACGTCAACTTCAGATGCAACCCCTCTTCTGTGGCCACAGCATGATGAAATAATGAGGAGGTTTAATCTTAATGATGCTGGTGCTCCTGTTCAATCAGTTGCTGATCTAAATTTGCCACGAATGGCTCCTGTGTCACTTCAGCGAGATGATGGTCCATCTGACAGCATGGTATGTAGAAAGGTGGTTCTCCCCTGTCTGAAATCAATGACCTGGGTGATGGAGAACAAAAATTCATCTCCTGGTAATAGAGTAGCTGTTATCAATTTGAAGTTACAAGATTACAGCAGGACTCCATCAGCAGAATCTGAGGTGAAGTTTCAGCTCTCTAGAGTTTCTTTGGAACCGATGTTGAGGTCTATGGCCTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAGTCTGAAGTCAAGTTTCAGGTCTCCAGGGACACATTGGGTGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTCTCTCATGCTGGAGATACGCAGTCAGAGCCTGTATGGAAAAGGCATCGAAAATAA 2652 0.4201 MDVQVINVEEGTGHRAMTDDGDAEPSEGEVNNAENSGSHVEDGISEPFVGMEFDSEDAVRTFYNEYAKRVGFTTKVGQHGRSKVDGTIMYREYVCGKEGLKRRLGDSCDAMIKVELKGQNKWVITKFVKEHSHSMGNPSKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSMDGNRVSSENIREAKNTPLEPSHAARNSAMMNNTGRPPIRRRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENHMSNVFWADARSRMAYSYFGDAVTLDTTYKVNQYRVPFVPFTGVNHHGQTILFGCALLLDDSEASFLWLFKTFLTAMNDRQPVSIITDQNKATQTAVSQVFPQARHCISKWHVLREGQEKLAHVCLAHRNFQVELYNCINLTETIEEFESSWSSILDKYELRRNDWLHSLYDARAQWVPAYFHDSFFAAISPSRGFDSSFFDGYVNQQTTLPMFFREYERALENWLEKEIEADFETICTTPVLRTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDQKAYVVTLNHSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILRRWTRNAKSGVGSDERAGELHGQESLTSRYSNLCREAIRYAEEGAVAVETYNAALSALKEAGKKIAAVKKSVSKVAPPSNQTGGTAYDDKKTSTSTSDATPLLWPQHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDSMVCRKVVLPCLKSMTWVMENKNSSPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHAGDTQSEPVWKRHRK 883
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4451g00060 883 Pfam SWIM zinc finger 551 585 IPR007527 GO:0008270
Pral4451g00060 883 MobiDBLite consensus disorder prediction 189 216 - -
Pral4451g00060 883 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 32 663 IPR031052 GO:0006355
Pral4451g00060 883 ProSiteProfiles Zinc finger SWIM-type profile. 551 587 IPR007527 GO:0008270
Pral4451g00060 883 MobiDBLite consensus disorder prediction 189 209 - -
Pral4451g00060 883 Pfam FAR1 DNA-binding domain 61 135 IPR004330 -
Pral4451g00060 883 MobiDBLite consensus disorder prediction 1 44 - -
Pral4451g00060 883 MobiDBLite consensus disorder prediction 672 698 - -
Pral4451g00060 883 SMART 26again6 562 589 IPR006564 GO:0008270
Pral4451g00060 883 Pfam MULE transposase domain 273 364 IPR018289 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4451g00060 Pral-Chr4451 479581 485675 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral4451g00060 MULE 1.5e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4451g00060 - - gmx:100786516 1425.22