Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4451g00052 ATGGAGTTTGATTCTGAAGACGCTGTGAGGACTTTCTACAATGAGTATGCCAAAAGGGTGGGTTTCACCACTAAAGTTGGTCAGCATGGCCGTTCTAAAGTTGATGGGACAATCATGTATCGGGAGTATGTCTGTGGCAAGGAAGGCTTAAAAAGAAGGTTAGGTGACAGTTGTGATGCAATGATTAAAGTAGAGTTAAAAGGTCAAAATAAATGGGTCATAACAAAATTTGTGAAGGAGCATAGCCATTCCATGGGGAATCCCAGTAAGGTGCATCACCTTCGGCCACGTAAGCATTTTTCTAGTGTTGGAAAGACCATGCCTGAAACTTACCAAGGAGTGGGACTTGTTCCAAGTGGTGTCATGTATGTGTCCATGGATGGCAATCGTGTTTCTAGTGAGAATATTCGTGAAGCTAAGAACACTCCTCTTGAACCAAGTCATGCAGCAAGGAATTCTGCAATGATGAATAATACTGGTAGGCCTCCTATTCGGAGGAGGACATTAGGGAGAGATGCTCAGAACCTGCTGGAGTATTTTAAGAAAATGCAGGCTGAGAATCCTGGTTTCTTCTATGCTATACAACTTGATGAAGAAAATCATATGTCGAATGTATTTTGGGCGGATGCAAGATCAAGGATGGCGTACAGTTATTTTGGTGATGCAGTGACGCTGGACACAACATACAAAGTGAATCAATACAGAGTTCCTTTTGTCCCATTTACTGGGGTGAACCATCATGGTCAAACAATTTTGTTTGGTTGCGCACTTCTTTTGGATGATTCTGAGGCTTCTTTCTTATGGCTCTTTAAGACATTTTTGACAGCAATGAATGATCGCCAACCTGTCTCTATAATTACAGATCAAAACAAAGCCACCCAGACAGCAGTTTCTCAAGTTTTTCCTCAAGCACGCCACTGTATAAGTAAGTGGCATGTCCTCAGAGAAGGCCAGGAAAAGTTGGCGCATGTTTGTCTTGCTCACCGGAACTTTCAGGTTGAACTTTATAATTGTATTAACCTAACAGAGACCATTGAGGAATTTGAGTCGTCTTGGAGTTCTATCCTTGATAAATATGAGCTCAGAAGAAATGATTGGCTTCATTCATTATATGATGCTCGTGCTCAGTGGGTTCCGGCATATTTTCATGATTCATTTTTCGCTGCAATATCTCCTAGTAGAGGATTTGACAGTTCTTTTTTTGACGGTTATGTCAACCAGCAGACAACATTACCAATGTTCTTTAGGGAGTATGAAAGGGCTTTAGAGAACTGGCTTGAGAAGGAAATAGAAGCAGATTTTGAAACTATATGCACCACACCAGTTTTGAGGACACCTTCACCCATGGAAAAACAGGCTGCGAGTCTTTATACAAGAAAAATATTTTCTCTGTTTCAGGAAGAGCTTGTTGAAACATTTGTGTATACTGCCAATAGAATTGAAGGTGATGAGGTAAATAGCACATTCAGGGTTGCAAAATTTGAAGATGATCAAAAGGCATATGTTGTCACATTAAACCATTCGGAGCTGAGAGCTAACTGTAGTTGTCAAATGTTTGAGTATTCAGGCATCCTTTGCAGGCATGTCTTAACCGTTTTCACAGTGACCAATGTACTTACATTACCACCCCATTACATCTTAAGACGGTGGACAAGGAATGCAAAATCTGGTGTTGGATCAGATGAACGTGCTGGTGAATTACATGGACAGGAGTCTCTAACATCACGGTATAGCAATCTATGTAGGGAAGCAATCAGATATGCTGAGGAAGGGGCAGTAGCTGTGGAAACATATAATGCTGCTTTGAGTGCCCTTAAAGAAGCTGGCAAGAAGATCGCTGCTGTGAAGAAAAGTGTTTCCAAAGTTGCTCCTCCTAGCAATCAGACTGGCGGGACTGCCTATGATGACAAAAAAACTTCTACGTCAACTTCAGATGCAACCCCTCTTCTGTGGCCACAGCATGATGAAATAATGAGGAGGTTTAATCTTAATGATGCTGGTGCTCCTGTTCAATCAGTTGCTGATCTAAATTTGCCACGAATGGCTCCTGTGTCACTTCAGCGAGATGATGGTCCATCTGACAGCATGGTATGTAGAAAGGTGGTTCTCCCCTGTCTGAAATCAATGACCTGGGTGATGGAGAACAAAAATTCATCTCCTGGTAATAGAGTAGCTGTTATCAATTTGAAGTTACAAGATTACAGCAGGACTCCATCAGCAGAATCTGAGGTGAAGTTTCAGCTCTCTAGAGTTTCTTTGGAACCGATGTTGAGGTCTATGGCCTACATCAGTGAGCAGCTCTCAACACCAGTTAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATACTGAGACAACTTCTGGGGAGTCTGAAGTCAAGTTTCAGGTCTCCAGGGACACATTGGGTGCCATGTTACGATCAATGGCTTATATTCGTGAGCAACTCTCTCATGCTGGAGATACGCAGTCAGAGCCTGTATGGAAAAGGCATCGAAAATAA 2502 0.4201 MEFDSEDAVRTFYNEYAKRVGFTTKVGQHGRSKVDGTIMYREYVCGKEGLKRRLGDSCDAMIKVELKGQNKWVITKFVKEHSHSMGNPSKVHHLRPRKHFSSVGKTMPETYQGVGLVPSGVMYVSMDGNRVSSENIREAKNTPLEPSHAARNSAMMNNTGRPPIRRRTLGRDAQNLLEYFKKMQAENPGFFYAIQLDEENHMSNVFWADARSRMAYSYFGDAVTLDTTYKVNQYRVPFVPFTGVNHHGQTILFGCALLLDDSEASFLWLFKTFLTAMNDRQPVSIITDQNKATQTAVSQVFPQARHCISKWHVLREGQEKLAHVCLAHRNFQVELYNCINLTETIEEFESSWSSILDKYELRRNDWLHSLYDARAQWVPAYFHDSFFAAISPSRGFDSSFFDGYVNQQTTLPMFFREYERALENWLEKEIEADFETICTTPVLRTPSPMEKQAASLYTRKIFSLFQEELVETFVYTANRIEGDEVNSTFRVAKFEDDQKAYVVTLNHSELRANCSCQMFEYSGILCRHVLTVFTVTNVLTLPPHYILRRWTRNAKSGVGSDERAGELHGQESLTSRYSNLCREAIRYAEEGAVAVETYNAALSALKEAGKKIAAVKKSVSKVAPPSNQTGGTAYDDKKTSTSTSDATPLLWPQHDEIMRRFNLNDAGAPVQSVADLNLPRMAPVSLQRDDGPSDSMVCRKVVLPCLKSMTWVMENKNSSPGNRVAVINLKLQDYSRTPSAESEVKFQLSRVSLEPMLRSMAYISEQLSTPVNKVAVINLKLQDTETTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHAGDTQSEPVWKRHRK 833
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4451g00052 833 ProSiteProfiles Zinc finger SWIM-type profile. 501 537 IPR007527 GO:0008270
Pral4451g00052 833 Pfam SWIM zinc finger 501 535 IPR007527 GO:0008270
Pral4451g00052 833 MobiDBLite consensus disorder prediction 139 166 - -
Pral4451g00052 833 Pfam MULE transposase domain 223 314 IPR018289 -
Pral4451g00052 833 MobiDBLite consensus disorder prediction 622 648 - -
Pral4451g00052 833 SMART 26again6 512 539 IPR006564 GO:0008270
Pral4451g00052 833 MobiDBLite consensus disorder prediction 139 159 - -
Pral4451g00052 833 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 1 613 IPR031052 GO:0006355
Pral4451g00052 833 Pfam FAR1 DNA-binding domain 11 85 IPR004330 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4451g00052 Pral-Chr4451 456240 485477 Dispersed/Proximal
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Pral4451g00052 MULE 1.4e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4451g00052 - - gmx:100786516 1353.19