Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4451g00041 ATGGAACTCAGATTTGAGTTTCTTGTTCTCTTCTTTTTCTCCTCGCTGGCTTCAATTTTTGTCATCGCCAAAGCACAGTGTAGCGAGACTTGTGATTTTGCTCTTGGTTCTTACTATGTTCGGAATGGTTCGAACCTCACTTACGTTTCGAAGGTGATGAAATCCCAGTTGCTTTCAACCCCAGACGATATCGTAAACTACAACAAAGACAAAATACCCAATAAAGACAGCGTTCCAGCACTCACAAGAGTCAACGTTCCCTTCCCATGTAAGTGCATCAATGGTGAATTTTTAGGCCACACGTTTCAATATGTTGTTGAGACAGGGGACACCTACGAGAAGGTTGCTGTGACAAACTATGCCAATTTGACCACTGTTGACTGGTTGCGGAAGTTCAATAGCTACCCACCCGACAATATTCCTGACACGGGAACCTTAAATGTCACGGTTAATTGTTCCTGCGGGAATAGCGATGTCTCAAAGGATTATGGGTTGTTCATCACGTACCCACTTAGGCCAGGGCAGACGTTGCAGTCAGTGGCAGGAGAAGCAGGTCTTGACACCGGACTACTGCAGAGGTACAACCCGTCTGTGAATTTCAACCAAGGAAGTGGTCTGGTTTATATTCCGGGCAAAGATCAAAATGGTACCTTTGTGCCTCTTCTGTCAAGAAAGGCTGGAGGTCTTGCTACTGGGGCTATAGTTGGAATATCCATTGGAGTAGTAGCAGGGCTTCTGCTATTGGCAGTTGGTATATATATTGGCTATTCTAGAAAGAAAAAGGCACACAAGGTGAAATTACTCTCGCAAGAGTCCAAAGGTCTCACTTCTCAGGATAGGAGAGATACAACCTCTGGTAATGGTGGAAATGGAACTTCAGGATCTGGTGGTCCTGTTGCTCCTATTGCTGGCATTGCTGGCATTACAGTGGACAAATCAGTAGAGTTTTCATACGAAGAACTAGCTACTGCCACAAACAACTTCAACATGGCTAACATGATTGGTCAAGGTGGTTTTGGTGCTGTCTACTATGCTGAGCTGGGAGGCGAGAAAGCAGCAATCAAGAAGATGGATATGCAGGCAACAAGAGAATTTCTGGCTGAATTGAAAGTCCTGACTAATGTTCATCACCTTAATTTGGTGCGTTTGATCGGCTATTGCGTTGAGGATTCTCTTTTCCTTGTCTATGAGTACATTGAGAATGGAAACTTAAGTCAGCATCTCCGAAGTTCAGGGAGAGATCCACTGCCTTGGTCTACCAGGGTGCAAATTGCTCTGGACTCAGCAAGAGGTCTTGAATATATTCACGAGCATACAGTGCCAGTATATATCCATCGTGACATAAAGTCAGCTAATATATTAATAGACAAAAACTTCCGTGGCAAGGTCGCAGATTTTGGATTGGCAAAACTGACTGAAGTTGGCAGCTCAACACTTCCCACTGGTCGTCTTGTGGGTACATTTGGATATATGCCACCAGAATATGCTCAATATGGGGATGTTTCTCCTAAAATAGATGTCTATGCTTTTGGAGTAGTTATCTATGAACTTATTTCTGCGAAGGAAGCTATCATCAAGATAAATGAATCAATCACAGACTCAAAGGGCATCGTATCTTTGTTTGATGGAGTTCTTAATCAACCAAATCCAACCGAAGATCTTCGCAAATTGGTGGACCCAAGACTTGGGGATGACTACCCTATTGATTCAGTTCACAAGATGGCCCAACTTGCCAAAGCATGCACGCAGGACAATCCCCAGCTGCGTCCAAGTATGAGATCTATCGTTGTTGCTCTTATGACACTTTCTTCTGCCACTGAGGATTGGGATGTTGGCTCCTTTTATGAAAATCCAGCTCTTATGAAGCTCATGTCTGGAAGATAG 1884 0.439 MELRFEFLVLFFFSSLASIFVIAKAQCSETCDFALGSYYVRNGSNLTYVSKVMKSQLLSTPDDIVNYNKDKIPNKDSVPALTRVNVPFPCKCINGEFLGHTFQYVVETGDTYEKVAVTNYANLTTVDWLRKFNSYPPDNIPDTGTLNVTVNCSCGNSDVSKDYGLFITYPLRPGQTLQSVAGEAGLDTGLLQRYNPSVNFNQGSGLVYIPGKDQNGTFVPLLSRKAGGLATGAIVGISIGVVAGLLLLAVGIYIGYSRKKKAHKVKLLSQESKGLTSQDRRDTTSGNGGNGTSGSGGPVAPIAGIAGITVDKSVEFSYEELATATNNFNMANMIGQGGFGAVYYAELGGEKAAIKKMDMQATREFLAELKVLTNVHHLNLVRLIGYCVEDSLFLVYEYIENGNLSQHLRSSGRDPLPWSTRVQIALDSARGLEYIHEHTVPVYIHRDIKSANILIDKNFRGKVADFGLAKLTEVGSSTLPTGRLVGTFGYMPPEYAQYGDVSPKIDVYAFGVVIYELISAKEAIIKINESITDSKGIVSLFDGVLNQPNPTEDLRKLVDPRLGDDYPIDSVHKMAQLAKACTQDNPQLRPSMRSIVVALMTLSSATEDWDVGSFYENPALMKLMSGR 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4451g00041 627 MobiDBLite consensus disorder prediction 270 294 - -
Pral4451g00041 627 ProSiteProfiles Protein kinase domain profile. 328 602 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4451g00041 627 SMART serkin_6 328 601 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4451g00041 627 ProSitePatterns Protein kinases ATP-binding region signature. 334 356 IPR017441 GO:0005524
Pral4451g00041 627 Gene3D Transferase(Phosphotransferase) domain 1 399 613 - -
Pral4451g00041 627 FunFam PTI1-like tyrosine-protein kinase 3 399 613 - -
Pral4451g00041 627 Pfam Protein tyrosine and serine/threonine kinase 330 598 IPR001245 GO:0004672|GO:0006468
Pral4451g00041 627 FunFam LysM receptor kinase 2 307 398 - -
Pral4451g00041 627 Gene3D Phosphorylase Kinase; domain 1 305 398 - -
Pral4451g00041 627 MobiDBLite consensus disorder prediction 270 298 - -
Pral4451g00041 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 443 455 IPR008271 GO:0004672|GO:0006468
Pral4451g00041 627 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 10 613 IPR044812 GO:0019199|GO:0045087
Pral4451g00041 627 SUPERFAMILY Protein kinase-like (PK-like) 312 599 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4451g00041 Pral-Chr4451 330554 338638 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4451g00041 16 627 Receptor kinase-like Gene Family AT3G21630 58.833 0.0 721
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4451g00041 PK_Tyr_Ser-Thr 1.1e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4451g00041 K13429 - gmx:100777781 882.478