Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral444g00004 ATGGGATCTGTTTGGGGTGCCATACTCGTGGTTCTGGCAGCAATATCTGTGTCTCACGCGCAGCTGAGCCCAACATTCTACAACCAAACATGCCCTAACGTCACCGACATCGTATCTGGGGTTATCCAGAGTGCTGCACAAAGCGATCCTCGTATAGGGGCCAGTCTCATCAGACTTCACTTCCATGACTGCTTTGTTCAAGGATGTGATGCTTCGCTTTTGCTGAACAACAGTGCCACCATTGTAAGCGAACAGACAGCTCCAGGCAATAATAACTCGATCAGAGGACTGGATGTCGTCAATAATATCAAATCTGCCCTCGAATCCTCTTGCCCCAACACTGTTTCTTGTGCTGATATCCTTGCCATTGCTGCTCAAGTCTCTGTTGTCCTGGCAGGAGGGCAGTCGTGGACAGTTCAGTTGGGAAGAAGGGATAGCCTAACAGCAAACCTAAGCCTCGCTAATTCTAACCTTCCTTCACCTTTCTTCACCCTCGACCAACTCAAGCAAAATTTCTCGAATCAAGGCCTTGACACCACTGATCTTGTTGCCCTTTCTGGTGCTCACACATTTGGAAGAGCTCAGTGCAGGTTCTTTGATAACAGACTGTACAATTTCAGCGGCGGCAACCCAGACCCAAACCTCAACACAACCTACTTGGCCACATTGCGCCAGTTATGCCCACAAAGTGAAGTAGGAAGAAACACGAACCTCACAAATCTGGACCTGACCACCCCTGATATCTTTGACAAAAACTACTACTCCAACCTCCAGCTCAAGAATGGCCTTCTTAACAGTGACCAGGTCCTGTTCTCTACTGCTGGTGCTGATACCATTGCGATTGTCAACAATTTCAGCGCCAACCAGACAGCTTTCTTTGAAGCTTTCGCTGCTTCCATGATCAAGATGGGCAATATCAGACCTTTGACTGGCTCCCAAGGTGAAATTCGAACGCAATGTAATATGGTTAACGGAGCATCATCAGGATTAGTGGGTGTGGCTTCTGCAGAATCACAGGACGGTTTGGTTAGTTCAATGTAA 1041 0.4784 MGSVWGAILVVLAAISVSHAQLSPTFYNQTCPNVTDIVSGVIQSAAQSDPRIGASLIRLHFHDCFVQGCDASLLLNNSATIVSEQTAPGNNNSIRGLDVVNNIKSALESSCPNTVSCADILAIAAQVSVVLAGGQSWTVQLGRRDSLTANLSLANSNLPSPFFTLDQLKQNFSNQGLDTTDLVALSGAHTFGRAQCRFFDNRLYNFSGGNPDPNLNTTYLATLRQLCPQSEVGRNTNLTNLDLTTPDIFDKNYYSNLQLKNGLLNSDQVLFSTAGADTIAIVNNFSANQTAFFEAFAASMIKMGNIRPLTGSQGEIRTQCNMVNGASSGLVGVASAESQDGLVSSM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral444g00004 346 CDD secretory_peroxidase 21 323 IPR033905 GO:0004601|GO:0042744
Pral444g00004 346 Gene3D - 26 324 - -
Pral444g00004 346 SUPERFAMILY Heme-dependent peroxidases 21 324 IPR010255 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 FunFam Peroxidase 25 172 - -
Pral444g00004 346 FunFam Peroxidase 159 303 - -
Pral444g00004 346 Pfam Peroxidase 41 287 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 ProSitePatterns Peroxidases proximal heme-ligand signature. 181 191 IPR019793 -
Pral444g00004 346 ProSiteProfiles Plant heme peroxidase family profile. 21 324 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PANTHER PEROXIDASE 72-RELATED 17 322 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 ProSitePatterns Peroxidases active site signature. 53 64 IPR019794 GO:0004601
Pral444g00004 346 PRINTS Haem peroxidase superfamily signature 115 132 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Haem peroxidase superfamily signature 133 145 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Haem peroxidase superfamily signature 181 196 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Haem peroxidase superfamily signature 53 67 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Haem peroxidase superfamily signature 242 257 IPR002016 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 Gene3D Peroxidase, domain 2 159 303 - -
Pral444g00004 346 PRINTS Plant peroxidase signature 180 192 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 114 124 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 55 75 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 240 255 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 31 50 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 298 311 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 133 148 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 95 108 IPR000823 GO:0004601|GO:0006979|GO:0020037
Pral444g00004 346 PRINTS Plant peroxidase signature 256 273 IPR000823 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral444g00004 Pral-Chr444 31026 34511 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral444g00004 8 328 Peroxidase AT5G06730 63.665 4.28e-145 412
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral444g00004 K00430 - gmx:111064645 443.351