Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4449g00011 ATGGCAGACGTTAACGAAACGTTTAGGGACATCAGAGAGCAGATTGTGAGCATGAACAAGTGCTTTGCGACGGCGCAGCAGCGTAATAAAGAAGACCTTGTTTTAAGTCTTTTTCAGTGCAGAAACTACCTCTCCGTTCATGACTGTGTTGGCTGCTTCGACGCCGCCGCCAAAGAAGTCCGCAATTGCCCTGATGGCACGGCCGGCGGCCTTGTCATCTACGATGGCTGCTTCCTCAGGTACGCCGCCGATGATTTCTTTGAAGAAACAACGGAAGATTTAAATGCTGCGTCGTGTGGTAACCAAACCATGACAGAATCCAGTATGTTTGCATCACTTGTGCAACAAGTGCTAAAGACTCTGCGAACAACAACACCCAAGAACCAAGGGTTTTTTGCGGCCACAAAGATAGAATTGCCTGATAATAGTACAACTATTTATGCCTTTGCTCAATGTTCTGAAACTATCGGTCAGACACAATGCTTCAATTGCTTGAACACTGGCTATAACAATATTTTGCCGACTTGTCTTCCCAATTCGGAGGGTAGGGCTTATGCTGGTGGGTGCTTTATGAGATATTCCACTACCTCCTTCTTTCCAGATAATTACCAGACAGTTCATATTACTCCCATGGGCAAACAAGGTTCAAACAAGAAGGGGACCATTATAGGTGTAGTTTTTGGAGGTGTAGCTTTTGCTTTGATCCTTCTTACACTATTAGCTTGGATTAAACAACCAAAAAGGCCTGAGAGACCAGTTCCTAGAGGAGATATATCTGGAGTAAGTAAGTTGAAAGGCCCAATTAATTTTAGTTATAGAGAGTTGGAGTTTGCAACTAAAAGTTTCAGTGCAGAAAATAAAATTGGAGAAGGAGGATTTGGTGCTGTATATAAGGGTACTCTGAAAAGTCGGAAAATAGTTGCTGTAAAGAAATTAATCATACGCCAATCTGGGAAGGTGGAAGAAGAATTTGAAAGTGAAGTGAAGCTTATAAGTAAAAACAGAGGTTCTCTTTGTTGGAAGCAACGGTATGATATAATTTTAGGAACAGCAAGGGGTTTGGCTTATCTACATGAGGAATTTCATGTACGTATCATACACAGAGATATAAAAGCTAACAACATTCTCTTAGGTGATGATCTCCAACCAAAAATTACTGATTTTGGCTTAGCAAAGCTTTTACCTAAAGAAAAATCTCATCTTAGCACAAAATTTGCCAGAACATTAGGATACAACGCACCGGAATATACAATTCATGGTCAACTATCGGAAAAAGCTGATATTTATAGCTTTGGCATTGTACTCCTAGAAATTATCAGTGGTGAAAAATGCAATGAATTGAAGATTCGCGATGATATTGAAGGTGAATTTCTACTTAAAAAAGCTTGGAAGCTATATGAGAGAGGCTTACACATAGAGTTGGTGGATAATACCATGAATCCAAATGATTATAAAGTAGAAGAAGTGAAGAAAATTATAGAGATTGGTCTGCTTTGCACTCAAGCATCTGCTGAATTAAGGCCATCAATATCTGAAGTAATTGTTTTGCTCCAAGGCAATGGCTCATTGGAGAATATGCGACCCACCATGCCTATCTTGATTGAAACTTAA 1611 0.3998 MADVNETFRDIREQIVSMNKCFATAQQRNKEDLVLSLFQCRNYLSVHDCVGCFDAAAKEVRNCPDGTAGGLVIYDGCFLRYAADDFFEETTEDLNAASCGNQTMTESSMFASLVQQVLKTLRTTTPKNQGFFAATKIELPDNSTTIYAFAQCSETIGQTQCFNCLNTGYNNILPTCLPNSEGRAYAGGCFMRYSTTSFFPDNYQTVHITPMGKQGSNKKGTIIGVVFGGVAFALILLTLLAWIKQPKRPERPVPRGDISGVSKLKGPINFSYRELEFATKSFSAENKIGEGGFGAVYKGTLKSRKIVAVKKLIIRQSGKVEEEFESEVKLISKNRGSLCWKQRYDIILGTARGLAYLHEEFHVRIIHRDIKANNILLGDDLQPKITDFGLAKLLPKEKSHLSTKFARTLGYNAPEYTIHGQLSEKADIYSFGIVLLEIISGEKCNELKIRDDIEGEFLLKKAWKLYERGLHIELVDNTMNPNDYKVEEVKKIIEIGLLCTQASAELRPSISEVIVLLQGNGSLENMRPTMPILIET 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4449g00011 536 PANTHER CYSTEINE-RICH RECEPTOR-LIKE PROTEIN KINASE 3 337 534 - -
Pral4449g00011 536 SUPERFAMILY Protein kinase-like (PK-like) 263 517 IPR011009 -
Pral4449g00011 536 ProSitePatterns Serine/Threonine protein kinases active-site signature. 365 377 IPR008271 GO:0004672|GO:0006468
Pral4449g00011 536 FunFam Cysteine-rich receptor-like protein kinase 2 94 198 - -
Pral4449g00011 536 ProSiteProfiles Gnk2-homologous domain profile. 1 86 IPR002902 -
Pral4449g00011 536 Pfam Protein kinase domain 340 494 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4449g00011 536 ProSitePatterns Protein kinases ATP-binding region signature. 288 311 IPR017441 GO:0005524
Pral4449g00011 536 Pfam Salt stress response/antifungal 99 195 IPR002902 -
Pral4449g00011 536 Pfam Salt stress response/antifungal 6 82 IPR002902 -
Pral4449g00011 536 Gene3D Phosphorylase Kinase; domain 1 258 332 - -
Pral4449g00011 536 Gene3D - 1 86 IPR038408 -
Pral4449g00011 536 Gene3D - 91 198 IPR038408 -
Pral4449g00011 536 FunFam Cysteine-rich receptor-like protein kinase 2 325 525 - -
Pral4449g00011 536 ProSiteProfiles Protein kinase domain profile. 203 533 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4449g00011 536 ProSiteProfiles Gnk2-homologous domain profile. 92 198 IPR002902 -
Pral4449g00011 536 Gene3D Transferase(Phosphotransferase) domain 1 333 527 - -
Pral4449g00011 536 SMART serkin_6 282 517 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4449g00011 Pral-Chr4449 149923 155128 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4449g00011 22 535 Receptor kinase-like Gene Family AT1G70520 33.275 6.48e-87 280
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Pral4449g00011 Pkinase 1.4e-25 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4449g00011 - - pcin:129300003 711.449