Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4448g00039 ATGATTTCATCTCAGAAGGAGCAAGTAGACACCACACCAATGGCTAAATCTCTCTGGGTTTCTCTGGTTCTGTTGGTGTTCTTGAATTCTCAGATTCCTTCTTCACAAGCTCAGCAAGAGTACGTCAACAACAAGCAACTAGACTGCGACAGTGGTGTCACCTACAATGCCACCTTAGGCAATCTCTGCAATGGCGTCTCTCGTTCCTGCAATTCTTATCTCACTTTCCGATCAATCTCTCCTCTCTACAACACTCCTTCCTCCATAGCTTTTCTCCTGAACTCCACACCCATTGCCATAGCCAAAGCCAACAACATCTCCGACGTTGCTCCCATCCCCGACAACACCATGGTCATCGTCCCCGTTAACTGCTCCTGCTCCGGCAGGTACTACCAGCACAACGCCTCCTACGTCTTGAAGCAACAAGGAGAAACATATTTCAGTGTTTCTAATAATACCTATCAGGCTCTCACTACTTGTCAAGCGATTGAAGCTCAGAACACTTATGATAAGCGGAATCTCCTTGCTGGGATGAATTTGAATGTGCCTCTTCGGTGTGCATGTCCCACGAGGAAGCAGGAAGATTCTGGGTTTAAGTATTTGCTCACCTATTTGGTCGCTCTAGGAGAATCGGTGGCTTCCATTGGTGGTCTGTTTGGGGTCGATGAACAGAGCGTTTTGGATGCCAACGAGCTTTCTTCGACTTCTATTATTTTCTATTTCACGCCAATCACGGTTCCTCTGAGAAAAGAGCCCGATCCAATCAAAGTGGCCTCTCCTCCTCCTCCGTCGCCGCCGCCGCCTCCTCCTACTACAGCGAGCTCTGCTGACTCTAGCTCTTCCAAGAAATGGGTCATCGTCGGAGTCACGGTCGGAGCTGTTCTTATTCTTCTCCTTGGCCTGTCGGGATTTCTCTTCTGCTACCGCCGCCGCCGCCGTCAGCGGAAATCTCAGCTGCCTTCTTTGGCTCCGACATCAACCGAAACCACCAAGAAGACCACAGACTCTGGTACAACGCAGTCATGGTCTATTTCTTCGGAAGGAATTCGCTACGCCATTGATTCGTTGACAGTTTACAAATTCGAGGATTTGCAGAAAGCGACGAGTTTCTTCAGCGAAGCTAACAAGATCAAAGGATCTGTGTACAGAGCAACTTTTAAAGGAGACGACGCTGCCGTTAAAATCTACAAAGGCGACGTGTCGAAAGAGATTAGCATTCTGAAGCGACTCAACCACACCAACATCACGAGGCTCTCCGGTTTCTGTGTCCACAAAGGAGACACTTATCTGGTTTATGAGTTCGCCGAGAATGGCTCACTCGACGATTGGCTTCATCCTAACGACAGAAGCAAAAACAAGTTTCAGAATTCATCTTCGACCCTAAATTGGAGACAGAGGGTTCAGATTGCTCACGATATAGCTGATGCATTGAATTACCTTCACAACTACACCAACCCTCCTCATATCCACAAGAATCTCCAGAGTCGGAATGTGCTTCTGGATGGGAATTTCAGAGCCAAAGTTTCAAACTTTGGATTAGCAAGAGAATTAGATGATGAAGAGGGTGGATTTCAAGTGACAAGGCATGTGATAGGCACACAAGGGTATATGGCACCAGAGTATATGGAGAACGGAGTGATAACTCCAAAAATGGACGTTTTTGCACTTGGGGTTGTGATTCTGGAGCTGATATCAGGGAAGGAAGCCATTGTTGGGGATGAGAAGCTTCTGTCCTCGTGTGCGAGGGAGGTGGTTGAAGGAGAGAATGTGAGGGAGAAGCTTCGAGGATTTGTGGATCCAAGTTTTGGGGATGAATACCCATTGGATTTGGTATACTCCATGGCACAAGTTGCTAAACGCTGTGTTGAACAAGACATTAATTCGAGACCAGGCATTTCTGAGGTGCTCACGACACTGTCCAAGATTCAGTCATCTACGCTTGATTGGGATCCTTCCGATGAACTTGACAGGTCAAGATCTGTTAGCCAAGTGTCTGAAGCCAGGTAG 2007 0.4753 MISSQKEQVDTTPMAKSLWVSLVLLVFLNSQIPSSQAQQEYVNNKQLDCDSGVTYNATLGNLCNGVSRSCNSYLTFRSISPLYNTPSSIAFLLNSTPIAIAKANNISDVAPIPDNTMVIVPVNCSCSGRYYQHNASYVLKQQGETYFSVSNNTYQALTTCQAIEAQNTYDKRNLLAGMNLNVPLRCACPTRKQEDSGFKYLLTYLVALGESVASIGGLFGVDEQSVLDANELSSTSIIFYFTPITVPLRKEPDPIKVASPPPPSPPPPPPTTASSADSSSSKKWVIVGVTVGAVLILLLGLSGFLFCYRRRRRQRKSQLPSLAPTSTETTKKTTDSGTTQSWSISSEGIRYAIDSLTVYKFEDLQKATSFFSEANKIKGSVYRATFKGDDAAVKIYKGDVSKEISILKRLNHTNITRLSGFCVHKGDTYLVYEFAENGSLDDWLHPNDRSKNKFQNSSSTLNWRQRVQIAHDIADALNYLHNYTNPPHIHKNLQSRNVLLDGNFRAKVSNFGLARELDDEEGGFQVTRHVIGTQGYMAPEYMENGVITPKMDVFALGVVILELISGKEAIVGDEKLLSSCAREVVEGENVREKLRGFVDPSFGDEYPLDLVYSMAQVAKRCVEQDINSRPGISEVLTTLSKIQSSTLDWDPSDELDRSRSVSQVSEAR 668
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4448g00039 668 Gene3D Transferase(Phosphotransferase) domain 1 435 660 - -
Pral4448g00039 668 MobiDBLite consensus disorder prediction 318 341 - -
Pral4448g00039 668 MobiDBLite consensus disorder prediction 254 273 - -
Pral4448g00039 668 PANTHER LYSM-DOMAIN RECEPTOR-LIKE KINASE-RELATED 21 652 - -
Pral4448g00039 668 MobiDBLite consensus disorder prediction 647 668 - -
Pral4448g00039 668 MobiDBLite consensus disorder prediction 650 668 - -
Pral4448g00039 668 FunFam PTI1-like tyrosine-protein kinase 3 435 653 - -
Pral4448g00039 668 MobiDBLite consensus disorder prediction 317 341 - -
Pral4448g00039 668 ProSiteProfiles LysM domain profile. 202 246 IPR018392 -
Pral4448g00039 668 Pfam LysM domain 204 247 IPR018392 -
Pral4448g00039 668 Gene3D Phosphorylase Kinase; domain 1 331 434 - -
Pral4448g00039 668 MobiDBLite consensus disorder prediction 252 278 - -
Pral4448g00039 668 Pfam Protein tyrosine and serine/threonine kinase 397 638 IPR001245 GO:0004672|GO:0006468
Pral4448g00039 668 SUPERFAMILY Protein kinase-like (PK-like) 341 638 IPR011009 -
Pral4448g00039 668 ProSiteProfiles Protein kinase domain profile. 293 647 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4448g00039 Pral-Chr4448 529131 531654 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4448g00039 17 661 Receptor kinase-like Gene Family AT2G33580 52.135 0.0 627
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Pral4448g00039 PK_Tyr_Ser-Thr 5.9e-37 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4448g00039 - - gmx:100818534 825.083