Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4448g00036 ATGGCAAGTGACCATGAAGCCTCTTCCTCAAATTCTTCCAGCTCCGATTCAACCCGAAGGACCTGCAAGTATGACATTTTCTTGAGTTTTAGGGGTGAAGATACTCGTAAAGGCTTTACAAACTACTTGTATCATGCATTAAATAGGAGTGGATTTAGAGTTTTTAGAGATGATGAAGAACTTGAAAGAGGAGAAGTTATCTCACAGGAACTTCGACAAGCAATTGAGGAATCTCACTTTGCGGTTGTTGTTCTCTCCAAAACTTATGCCTCTTCTTCATGGTGTTTAAATGAGCTCCAACACATTCTTGTCTCAAGAAATAAGCTAGGTCAAATAGTTTTCCCCATCTTTTATCATGTAGGTCCATCTGATGTAAGAAACCAACGAAAAGCCTTTGGTGAATCTTTTGCCAAACTTGAACGGAAGTTCCAACATGACCAACCAAAGCTGCAAAAATGGAGGGATTCTCTAACAGAAATGGCTAATTTATCTGGTTTTGATTCCAGTCAATATAGGTACGAAACAGAACTCATTGAGAATGTGGTTGGACATTTATGGGACCAATTTTGTTCTGAATTGCCACCTGTCAATGTAAGTGATGCACTAGTTGGAATTGAATGGAGAATAGACCAAATCCTTTCAGTGTTAGAGATAGGGTTGGATGATGTTCGGTTTATAGGAATATGGGGCATGGGAGGTGTGGGCAAGACCACTCTTGCTAGAACTGTCTATGAGAGGTTTCATAGCCAATTTGACTTGCATTGCTTGCTTGCCAATGTCAGGGAAGATTCGGAAAGGAATGGCCTTGCCCACTTACAAAGTAAACTGCTGGCACGTCTCAAGATAAGAAACATGCAAATTGAAGACAAGCATGAAGGAAAGAAAACAATAGGATACCTTTTCCGCAATAGAAAAGTTATGCTTATCCTCGATGATGTAAATCTTATAAGCCAATTAGAGGGTTTAGCTGGAAGCCCGGAGTGGTTTGGTAAAGGGAGTAGAGTAATCATTACAACCAGGGATGTTCACTTACTGAGATCTCATAATGTGGAGGAAATATACGAGGTGAAACCAATGAACCATGATGAGTCTCTCCAACTCTTCTGTCAAAAAGCATTTAGAAGAGATCCACCTACAAAGAGTTTATTGGAATTGTCAAAATCAGTAATTAATTATGCAAATGGCCTTCCTTTAGCTCTCTGTGTCATGAGCTCCTTCTTTTCAGGACGGAGGGAAAGTGAATGGGAAGATGCTTTGGATTTGTTGAAAAAGGATTCAAGTAATAATATTTTTAAGATACTCAGATTAAGTTATGATGCATTAAACCATGTGGAAAGGACGATATTTTTAGATATTGCATGTTTTTTCAATATGTGGGGCAAGGATGAAGTAACACAAATATTGGCAAGCTGTGGTTTTGAGGCAACAATTGGTATGAAAAGTCTTATTGACAAATCATTGCTAGCTGAAATTGAGGTTGGCAATATCAAGTACATAGAGATGCATGGTCTGGTTCAAGAAATGGGTAGGCTTATTGTTTTCGATGAATCTCGTGATGATGTTGGAAGGCGCAGTAGATTGTGGTTTTCTCATGACATTGATCAAGTACTAAATAGAAATATGGGAACTAAAGCAACGGAAGGCGTGGTTCTGCCTTTTACTTTTGCGAAAGATGAAGCAAATTGGAATCCTGCATCTTTCTTACAAATGCGTCTGCTTCGATTACTCATCATATCATGTAATTTTAACCTTCCCCGTTGTCTTATGGGCTTTCCATGGGCATTAAAAGTTCTTCACTGGTATGGATATCCTCTAAGAGATCTTCCCTTGAATGTGAAACCTTATGAACTTGTATATCTCAAGATGCACAATAGCAAACTAAAGCAACTTTCTCAGGGCACACAATTTATGGAGAATCTAAAGATTTTGGACTTGAGCCATTCCAAGTACCTTATTCAAAGTCCAGAATTTTATGGACTTCAAAATTTAGAAAGATTAGTCCTTGAAGGCTGCGCCAAACTTGCTAATATTCATCCTTCACTTGGACAGCTCCACCATCTTCTTGAAGTAAATTTGAAAGGTTGCCTGAATCTTAAAGTCCTTCCAAGACAACTGGAAATGGCATGTTTGAAAGAGTTTGTTCTAGAAGAGACTGGCATAGAAGATGTTCCTGAGTCACTTGGATCCTTAACTAGAGTTGAAGTTTTGAATCTAAGAAATTGCAGAAGTCTTAAATTCCTTCCAAGAAAACTGGACATGAACTCTTTGAAGGAATTTGTTCTTTGTGGATGCACACAAGTTAGAGATCTTCCAGAATTTGGAGAAAATATGAAAAATCTCATTACACTTGATGTGCAAGAGACAAGTATAGCCAAACTTCCTGAATCTCTTGGATCATTAACTAGTCTCCAAACTTTGAATTCAAGGGGTTGCCAAAATCTTATTAGCCTTCCCCACAGCATTAAAAAATTGAAGCACTTGAAAGTTCTCAATATTTCTGGTTGTTCAGCTTTTTCTAACCTGCTAGATAATCTCAATGAAAATGAAGCCTTGGAAATTCTTGATGCAAGCACAACTGTTATAACAGAAGTACCTTCATCCATTGGTGATTTACAAGGACTCAAGAAACTGTCATTTCATGGATGTTCTTACCCTATGGGCTTAATGTTGCCCAATTCTATCTTCAACATTAAGTCATTGACAAAATTGGATTTAAGCTACTGCAATATAGATGACGGAATCCTTCCCTATGATCTCGGTGGCCTATCATCATTGAAAAAGTTAGATCTGAGTGGAAACATGGTTGTAAATCTACCGGCTAGCTTCATTTCTAATCTTTTGGATCTACGATTTCTTTATCTGAATTCTTGCCCAAGGCTTCAATTTTTGCCACAACCTTCACCAGGTTTATATCTAATGGATGCAGGAGATTGTGCTTCACTGACAACTTTGTCAGATGTAAAATTGTTACATCTCTTTACTTCGCTTAACCAGGGTGGAAACCATGTTAAAAGGCTATCGCATAGATTGAATGCTGACTCATTGGCAACAATGTCCTTCAAAGCCTTTTCAGTCACTATTCCAGGAATGGAAATACCATCATGGTTTGAGAACCAGAAAAGTGTTTCCCTGAATAAGGAATCTAAAAGAGCAATAACAATTGACATGCCTCCATGTGAATGGCTTGGATTTGTGTTATGCATTGTGCTAGAAGATGACATGTTTTATTCCACAGGGGCCAACCAAAATCCCTTTGGGCTCTCTTTTTATGCAAAAGCTTCAAATGATCATATCGTATTCCTCCAAGGAAGGGACCGAAAATGTGAGAAGGGAATAAGTTCTCCTCACTTGTGGATCCTGTTTGGGCAAATTGGAAAGCAGAGTGATTTATCAATGGATTACAGCCAGCTTCTCTTGAAATTTGAAGCCCAAAGGAATGATGAACCAAGTTCCATTAAGTGTGGGTGGCGAGTCATTGACAAAATAGATTTTGAAAACTTCCTTTCAACTCTGCAAGAGCGCCAGGATCAAGAAAACACAAGGTGCTGTGAAGCTGAAGATTCAGTGAGTGGGAGCCATCGAGCCATAGTCAATGAACGTGAAACCGAATCCTCAGAGCCCGCTTCTTCATTCTTAGAAAAAGAAGGCGATTTATATGATTTACAGATTCATTTTGATATTGACAATGCAGGCTCCAGCCAATGCAGACGTAGCCATTGTGACTTTGCCCCAACCATTGCAGCTCCACCCACAGGCATCCATTCATCGTCTTCATCAAATTGCCATCCACGTGAGAGTGTGACTAGCCAGGTTGATTTAGAGGAAGAAGATGAGGCAGGAATTACAATCGAATTAGATTGGACAAGTGGTAGTGGTGACAAAGTAGGGAAGAGACAACTAGTGGGAGTGTTAATAACAGAGGAAGCTTTGAACAAGCACAAAGTGATGAGCATGGTTGAACAGGCTTGGAATTTGCTGATAGAGGAGGTGGATATCTTGGAATTAGGAGTTAATTCATATATGTTTACCTTTGGGAAGGAGGATGATTACTTTAGGGTGTTAAGAGGCAGACCCTGGTACATCTCAGGATGCCTACTCAATATCCAAGAATGGACAGAGTATATGGTGCTATCAGATGGAAGATTCAACATGTCACCTTTCTGGGTACAATTTCATGATGTGCCTGTAAAGGCTATGACAGTGAATAATCTCATAAAAATAGGGAAAAAGATGGGTGAGGTACTAATGGTGGAATGTCCTATTGTTAATGGAAGGATTATTAGGAGTTTTGCAAGGGCAAGGATAAATGTTGATCTAAGCCGTCCCTTAACAACTGGGTTCTGGATTCTAAGACCAGAGCTGCCAAAGCTATGGAGCTCAGTGAGGTACGAAAGGCTCGAGGGTTTTTGCTACAAGTGCGGAATAATAGGGCATAATTCAAGAACCTGTAATTCCAAAAGGAAGATGGCAGTGGTGGATCCAGCAGAACCTATGTATGGGTCATGGCTCAGTGTTGCTGCTGAGAGAAATTGTGATTATGCTATACGTGTTTATGAACAAGGATGGTCTAAAGTTGGTGGGGATGGTGACAAAAAGATGCAGTTCAGCACTGACAATGGAAGACTTAGACATCACGACTTTGCTCCTCTCATTGCAAATCCAGCCATTACAGCACCACCATCCACGGCCACCCAATCGCCTTCTTCATCGAACTGCCATCCATCTGAGAGTGTGACTACTCAGGTATGCTATTTATAA 4758 0.3976 MASDHEASSSNSSSSDSTRRTCKYDIFLSFRGEDTRKGFTNYLYHALNRSGFRVFRDDEELERGEVISQELRQAIEESHFAVVVLSKTYASSSWCLNELQHILVSRNKLGQIVFPIFYHVGPSDVRNQRKAFGESFAKLERKFQHDQPKLQKWRDSLTEMANLSGFDSSQYRYETELIENVVGHLWDQFCSELPPVNVSDALVGIEWRIDQILSVLEIGLDDVRFIGIWGMGGVGKTTLARTVYERFHSQFDLHCLLANVREDSERNGLAHLQSKLLARLKIRNMQIEDKHEGKKTIGYLFRNRKVMLILDDVNLISQLEGLAGSPEWFGKGSRVIITTRDVHLLRSHNVEEIYEVKPMNHDESLQLFCQKAFRRDPPTKSLLELSKSVINYANGLPLALCVMSSFFSGRRESEWEDALDLLKKDSSNNIFKILRLSYDALNHVERTIFLDIACFFNMWGKDEVTQILASCGFEATIGMKSLIDKSLLAEIEVGNIKYIEMHGLVQEMGRLIVFDESRDDVGRRSRLWFSHDIDQVLNRNMGTKATEGVVLPFTFAKDEANWNPASFLQMRLLRLLIISCNFNLPRCLMGFPWALKVLHWYGYPLRDLPLNVKPYELVYLKMHNSKLKQLSQGTQFMENLKILDLSHSKYLIQSPEFYGLQNLERLVLEGCAKLANIHPSLGQLHHLLEVNLKGCLNLKVLPRQLEMACLKEFVLEETGIEDVPESLGSLTRVEVLNLRNCRSLKFLPRKLDMNSLKEFVLCGCTQVRDLPEFGENMKNLITLDVQETSIAKLPESLGSLTSLQTLNSRGCQNLISLPHSIKKLKHLKVLNISGCSAFSNLLDNLNENEALEILDASTTVITEVPSSIGDLQGLKKLSFHGCSYPMGLMLPNSIFNIKSLTKLDLSYCNIDDGILPYDLGGLSSLKKLDLSGNMVVNLPASFISNLLDLRFLYLNSCPRLQFLPQPSPGLYLMDAGDCASLTTLSDVKLLHLFTSLNQGGNHVKRLSHRLNADSLATMSFKAFSVTIPGMEIPSWFENQKSVSLNKESKRAITIDMPPCEWLGFVLCIVLEDDMFYSTGANQNPFGLSFYAKASNDHIVFLQGRDRKCEKGISSPHLWILFGQIGKQSDLSMDYSQLLLKFEAQRNDEPSSIKCGWRVIDKIDFENFLSTLQERQDQENTRCCEAEDSVSGSHRAIVNERETESSEPASSFLEKEGDLYDLQIHFDIDNAGSSQCRRSHCDFAPTIAAPPTGIHSSSSSNCHPRESVTSQVDLEEEDEAGITIELDWTSGSGDKVGKRQLVGVLITEEALNKHKVMSMVEQAWNLLIEEVDILELGVNSYMFTFGKEDDYFRVLRGRPWYISGCLLNIQEWTEYMVLSDGRFNMSPFWVQFHDVPVKAMTVNNLIKIGKKMGEVLMVECPIVNGRIIRSFARARINVDLSRPLTTGFWILRPELPKLWSSVRYERLEGFCYKCGIIGHNSRTCNSKRKMAVVDPAEPMYGSWLSVAAERNCDYAIRVYEQGWSKVGGDGDKKMQFSTDNGRLRHHDFAPLIANPAITAPPSTATQSPSSSNCHPSESVTTQVCYL 1585
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4448g00036 1585 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Pral4448g00036 1585 Gene3D - 17 191 IPR035897 -
Pral4448g00036 1585 ProSiteProfiles TIR domain profile. 22 189 IPR000157 GO:0007165
Pral4448g00036 1585 SMART till_3 23 163 IPR000157 GO:0007165
Pral4448g00036 1585 SUPERFAMILY L domain-like 501 883 - -
Pral4448g00036 1585 MobiDBLite consensus disorder prediction 1558 1580 - -
Pral4448g00036 1585 ProSiteProfiles Zinc finger CCHC-type profile. 1470 1483 IPR001878 GO:0003676|GO:0008270
Pral4448g00036 1585 Pfam Domain of unknown function (DUF4283) 1297 1433 IPR025558 -
Pral4448g00036 1585 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 194 452 IPR027417 -
Pral4448g00036 1585 Gene3D - 359 442 IPR042197 -
Pral4448g00036 1585 Pfam Zinc knuckle 1462 1484 IPR025836 -
Pral4448g00036 1585 Pfam TIR domain 23 188 IPR000157 GO:0007165
Pral4448g00036 1585 PRINTS Disease resistance protein signature 225 240 - -
Pral4448g00036 1585 PRINTS Disease resistance protein signature 635 651 - -
Pral4448g00036 1585 PRINTS Disease resistance protein signature 300 314 - -
Pral4448g00036 1585 PRINTS Disease resistance protein signature 393 407 - -
Pral4448g00036 1585 SUPERFAMILY Toll/Interleukin receptor TIR domain 13 166 IPR035897 -
Pral4448g00036 1585 Gene3D Ribonuclease Inhibitor 707 886 IPR032675 -
Pral4448g00036 1585 Gene3D Ribonuclease Inhibitor 561 706 IPR032675 -
Pral4448g00036 1585 Gene3D Ribonuclease Inhibitor 887 1044 IPR032675 -
Pral4448g00036 1585 Gene3D - 192 354 IPR027417 -
Pral4448g00036 1585 SUPERFAMILY L domain-like 850 1017 - -
Pral4448g00036 1585 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 751 IPR044974 GO:0006952
Pral4448g00036 1585 Pfam NB-ARC domain 210 439 IPR002182 GO:0043531
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4448g00036 Pral-Chr4448 483264 489655 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4448g00036 24 879 WRKY Transcription Factor Family AT4G12020 30.584 2.63e-98 348
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4448g00036 - - pcin:129298711 1837.39