Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4448g00034 ATGGCAAGTAACCAAGCAGCATCTTCTTCAAATTCTTCCAACTCCAGTTCAACCCAAAGAACTTGGAAGTATGACATCTTTTTGAGTTTTAGGGGTGAAGATACTCGTAACGGCTTCACTGACCACTTGTATCATGCCTTAAAGAGGAGTGGATTCACTGTTTTTAGAGATAATGAAGAACTTGAGAGAGGAGAAGTCATTTCCAAAGAACTCAAACAAGCAATTGAGGGTTCTCTGTTTGCAATTGTTGTTCTCTCAAAAAATTATGCCTCTTCTTCATGGTGTTTAAATGAGCTCGGACATATTCTTTACTCAAGAAACAATTTGTCTCGACAAGTTTTCCCCATATTTTATGATGTAAATCCTTCTGATGTACGACATCAAAGAGAAAGTTTTGCCAAAGCTTTTGATGGGCATCAAATGCTTCAGAGGGACAATGAGGTCATGGAAAGTTGGAGAGTTTCTCTCAGGAAGGTTTCCGACTTATCTGGTTGGGATTGTAATAAGAATCGGTCTGAAGCAGAACTTGTTGACACAGTGGTTGAGGAGTTGTGGACCAAATTACATCCTAGACTACCACCTTATACTGAAGGACTCATTGGAATTGACAATAAAGTGGAACAACTAGAGCCACTGTTGGAGATAGGTTCGAATGATGTTCGGTTTGTAGGAATATGGGGCTTAGGGGGTGTTGGGAAGACAACAATTGCTTGGGTTGTTTTTGAGAAATATTGTAGCCAATTTGATATTAGTTGCTTTCTTCACAATGTTAGGGTAGCTTCCAAAAGAGATGGTGGCGAGGTTCAGTTACAAAGTCAATTTCTTTCAAAACTCAAAAGAAGAAACATGAAAATTGAAAACAGCTATGAAGGGAAGAAAATAATCCAAAACCGTTGTTGCAATAAAAAGGTTTTACTTATCCTTGATGACGTTAGCCATACAACCCATTTAGAAAATTTGGCTAATAGCCCAAACTGGTTTGGTGCTGGGAGTAGAGTGATCATAACAACTAGGCATTTAGACTTGTTACGTGGAGCGCGTGTAGCATATCAACACGAGGTTAAAACTATGAACCCAAATGAAGCCCTTCAACTCTTTTGTCAGAAAGCATTTGGAAGAAGTGAGCCTCAGGAGGATTTGTTGGAGCTGTCTAAAATTGTTTGTGATTATGCAGGAGGCCTTCCTTTAGCTCTCTCTGTTTTGGGCTCTTTTTTCTGTGGAAAAAGCATTGTGCAATGGGAAGATGCTTTGGATATGTTGAGGAAAGATGCCTTGGGAATGTTGAGGAAAGATCCCCATGAAGATATTTTTGGGATACTTAAAATAAGTTTTGATGCATTAACTGATATAGAACAAGCAATATTTTTAGATATTGCTTGCTTCTTCAATGGTTGGAGCAAAAACAAAATAACAAAAATATTAGAAAATTGTGGTTTTAATGGAAAAATTGGAATAACAACTCTCCAAGAAAAATCTATGCTGAAGGAATATGGCAGTACTTTAGTGATGCATGATTTGGTGGAACAAATGGGTAGGAAAATTGTTGTGGATAAGTCTTCTAATTATGTTGGAAACCGTAGTAGATTGTGGACTAACGAAGACATTGATAAAGTTATGGAAAACAATTTAGGTACAAATGAAATACAAGGTATGGTTTCGTCCACATCTTGTGACACATTTTGGGATTTTGAACCATTTTCAACATTGCATAATGTTGTTTACCAAGGCACAAAAGAAATAAAAGGTATGGCCTCATCCACATCTTATAAGGCATTTTGGGATCCTGAAGCATTTTCAACATTGCACAACCTCAGATTACTGATGATATCAAGTGATTTTCATCTCCCTAATGGCCTCAAATGTCTTTCTCATGCTTTGAAAGTACTTTATTGGACAAAATATCCTCTAAACACTCTTTCTTCTGGAACCCGATTGCATGAACTTGTTGATCTTAGAATGAATCATAGCAAATTAAAGAAACTTAGCCTGTGCTCAAAGAATTTGAAGATTTTGGACTTGCGTTATTCCAAAAACTTGATTGAAACTCCTGATTTTTTGGAAATTCCAAACCTGGAAAGATTGGAACTCGAAGGTTGTGAAGAACTTGTTGACCTTCATGCTTCGATCGGACAACTCAAAAAGCTTCAAGCGTTGAATTTGAAAGGTTGCAAAAATCTTAGATTCCGTTGTCCAAAAAAATTGGAAATGACTGCTCTGAAAGAATTTGTTCTTTCTGGATGTCTTCAAGTAAAATTTCTCCCAGAGTTTGGAGAAAGTATGAAAAATCTTGAAACACTTGATGCTGGGGAGACAAATTTAGTCAAACTACCTGAGTCACTTAGCTTATTGATTGGTCTTAAGACTTTGAAATTAAGGGGCTGTAAAAATCTTGTTTGCCTTCCTCAGAGCATTCACAATTTGAAGCGCCTTGTAGTTATTGATATATCTGGCTGCTCAAAGTTTTCTAGATTGCCAGAAAAGTTGAATGAAATTGAAGGCTTGGAGGAGCTCGACGCAAGTGAAACCGATATAACAGAAATACCTCCTTCCATTGGTGGTTTAGAGAAACTCAAGAAATTGTCATTTCGTCGGTGCAAAAGGTCGATGTTATACCCTTGGAGCATGATTCTTCCTTGGGGGCATTCAATTCATAAGGGCTTAACATTGCCTTCTTCAATGCTGAGTATTAAATCACTGAGAGAATTGGATTTAGGCTATTGCAAGATTGATGATGCATCCATGCCAGATGACTGGAGGGGCTTATCATCATTGGAGAGATTAGATCTGAGTGGAAATAATTTTAAGAGTCTACCTGCTGGCTGCATAGCTAATCTTTTGAAATTGGAACGTCTGTATTTAAATTCTTGCTCTGAACTTCAGTCGTTGCCGCAGACTCCGCCAAGTTTATGTATCCTGGAGTTAGAAGAATGTGCTTCGTTGGAAACAGTGGGAGGTGAACAATTATCACATTTCTTTGCTTCAATGGACCAATGGAAGGTGAAAACAACGCCTTGGATGGATGAAACTCTCTCGGTGACTACTCCTGGACGTGAAATACCATCATGGTTTGACCATCAAATTGATCTTTGTCTGGATGAATATGGTAGTGCTTTATTGATGGTAGACATACCTTCTTGGGAAGAAATGGTGGGAATTGGATTATGCACTCCGTTAGAAGGTAAGTTTTATTCCACTGAACCCGACACAAGAGAATCGGCTTTGTCGTGGAGTCTTTATGATTTCGCAGTACATCCCAAAACCACAAGACGATAA 3273 0.3816 MASNQAASSSNSSNSSSTQRTWKYDIFLSFRGEDTRNGFTDHLYHALKRSGFTVFRDNEELERGEVISKELKQAIEGSLFAIVVLSKNYASSSWCLNELGHILYSRNNLSRQVFPIFYDVNPSDVRHQRESFAKAFDGHQMLQRDNEVMESWRVSLRKVSDLSGWDCNKNRSEAELVDTVVEELWTKLHPRLPPYTEGLIGIDNKVEQLEPLLEIGSNDVRFVGIWGLGGVGKTTIAWVVFEKYCSQFDISCFLHNVRVASKRDGGEVQLQSQFLSKLKRRNMKIENSYEGKKIIQNRCCNKKVLLILDDVSHTTHLENLANSPNWFGAGSRVIITTRHLDLLRGARVAYQHEVKTMNPNEALQLFCQKAFGRSEPQEDLLELSKIVCDYAGGLPLALSVLGSFFCGKSIVQWEDALDMLRKDALGMLRKDPHEDIFGILKISFDALTDIEQAIFLDIACFFNGWSKNKITKILENCGFNGKIGITTLQEKSMLKEYGSTLVMHDLVEQMGRKIVVDKSSNYVGNRSRLWTNEDIDKVMENNLGTNEIQGMVSSTSCDTFWDFEPFSTLHNVVYQGTKEIKGMASSTSYKAFWDPEAFSTLHNLRLLMISSDFHLPNGLKCLSHALKVLYWTKYPLNTLSSGTRLHELVDLRMNHSKLKKLSLCSKNLKILDLRYSKNLIETPDFLEIPNLERLELEGCEELVDLHASIGQLKKLQALNLKGCKNLRFRCPKKLEMTALKEFVLSGCLQVKFLPEFGESMKNLETLDAGETNLVKLPESLSLLIGLKTLKLRGCKNLVCLPQSIHNLKRLVVIDISGCSKFSRLPEKLNEIEGLEELDASETDITEIPPSIGGLEKLKKLSFRRCKRSMLYPWSMILPWGHSIHKGLTLPSSMLSIKSLRELDLGYCKIDDASMPDDWRGLSSLERLDLSGNNFKSLPAGCIANLLKLERLYLNSCSELQSLPQTPPSLCILELEECASLETVGGEQLSHFFASMDQWKVKTTPWMDETLSVTTPGREIPSWFDHQIDLCLDEYGSALLMVDIPSWEEMVGIGLCTPLEGKFYSTEPDTRESALSWSLYDFAVHPKTTRR 1090
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4448g00034 1090 PRINTS Disease resistance protein signature 710 726 - -
Pral4448g00034 1090 PRINTS Disease resistance protein signature 222 237 - -
Pral4448g00034 1090 PRINTS Disease resistance protein signature 391 405 - -
Pral4448g00034 1090 PRINTS Disease resistance protein signature 298 312 - -
Pral4448g00034 1090 Pfam NB-ARC domain 206 445 IPR002182 GO:0043531
Pral4448g00034 1090 ProSiteProfiles TIR domain profile. 22 188 IPR000157 GO:0007165
Pral4448g00034 1090 Gene3D Ribonuclease Inhibitor 585 733 IPR032675 -
Pral4448g00034 1090 Gene3D Ribonuclease Inhibitor 734 875 IPR032675 -
Pral4448g00034 1090 Pfam TIR domain 23 191 IPR000157 GO:0007165
Pral4448g00034 1090 Gene3D - 188 351 IPR027417 -
Pral4448g00034 1090 Gene3D - 356 448 IPR042197 -
Pral4448g00034 1090 SUPERFAMILY "Winged helix" DNA-binding domain 435 539 IPR036390 -
Pral4448g00034 1090 Gene3D - 17 187 IPR035897 -
Pral4448g00034 1090 Gene3D Ribonuclease Inhibitor 880 1014 IPR032675 -
Pral4448g00034 1090 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 24 754 IPR044974 GO:0006952
Pral4448g00034 1090 Pfam Leucine rich repeat 898 956 IPR001611 GO:0005515
Pral4448g00034 1090 SUPERFAMILY RNI-like 591 795 - -
Pral4448g00034 1090 SUPERFAMILY RNI-like 736 991 - -
Pral4448g00034 1090 SMART LRR_typ_2 831 854 IPR003591 -
Pral4448g00034 1090 SMART LRR_typ_2 921 944 IPR003591 -
Pral4448g00034 1090 SMART LRR_typ_2 760 783 IPR003591 -
Pral4448g00034 1090 FunFam Disease resistance protein (TIR-NBS-LRR class) 20 190 - -
Pral4448g00034 1090 SMART till_3 23 162 IPR000157 GO:0007165
Pral4448g00034 1090 SUPERFAMILY Toll/Interleukin receptor TIR domain 14 165 IPR035897 -
Pral4448g00034 1090 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 188 458 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4448g00034 Pral-Chr4448 331885 404253 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4448g00034 700 951 WRKY Transcription Factor Family AT4G12020 31.621 1.72e-10 63.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4448g00034 - - pcin:129302825 1182.16