Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4448g00033 ATGCAAAAGGAAAAATCTATGTTGAAGGAATATGGCAGTATTTTGGTGATGCATGATTTGGTGGAACAAATGGGTAGGAAAATTGTTATGGATAAGTCCTCTAATTGTGTTGGAAATCGTAGTAGATTGTGGACTAATGAAGATATTGATAAAGTTATGCAAAACAATTGGGGTATAGAAGAAATAGAAGGTATGATTTCATCCCCATCTTGTGAGGCATTTTGGGATCCTAAACCATTTTCAAAATTGCATAACCTTGTTTATCAAGACACAAGAGAAATACAAGGTGAGGTTTCATCCACATCTTGTAAGGCATTTTGGGATCGTGAAGCTTTTTCAACATTGCGTAAGCTTAGATTACTCATGATATCAAGTGATTTCCATGTTCCTGTTAGCCTCAAATGTCTTTCTCATGCTTTGAAAGTACTTTATTGGACAAAATATCCTTTAGACACTCTTCCTTCTGGAACTCGATTGCATGAACTTGTTGATCTTAGAATGCATCATAGCAAATTAAAGAAACTTGGCCTGTGCTCGAAGAATTTGAAGTTTTTGGACTTGCGTTTTTCCAAAAACTTGATTAAAACTCCTGATTTTTCTAAACTTCCAAATTTGGAAAGATTAGAACTTGAAGGTTGTGAAAAACTTGTTGACCTCCATCCTTCAATTGGACAGCACAAAAAGCTTCAAGTGTTGAACTTGAAAGGTTGCAAAAGTCTTATAGCCCATTGTCCCAAAAAATTGGAAATGACTGCACTAAAAGAATTTGTTCTTTATGGATGCATTCGAGTGAAATTTCTCCCAGAGTTTGGGAAAAATATGAAAAATCTAGAAACGCTCGATGCTGGGGAGACAAATTTAGTCAAACTTCCCGAGTCACTTGGCTTGTTGACTGGTCTTAAAACTCTGAAATTAAGGGGTTGCAAAAATCTTGTTTGCCCTCCTCAAAGCATTCACAATTTGAAACATCTTGTCCTTGTTGATATTGCTGGGTGCTCAAAATTTGCTAGATTGCCAGAGAAGTTGAATGAAATTGAAGCCTTGGAGGAGCTAGACGCAAGTGAAACCGATATAACTGAAATACCGTGTTCCATTGGTGGTTTAGAAAAACTCAAGAAATTGTCATTCCGTGGGTGCAAAAGGTCAACATTGAACTCTTGGAGCATGATTCTTTCGTTGAAGCACATGTTTTGGAGGCATTCAATTCATAAGGGCTTAACATTGCCTCCTTCAATGTTCAATCTTAAATCACTGACACAATTGGATTTAAGCTATTGCGGTTTTGATGATGGATCCATTCCGGATGACTTGGGTGGCTTATCATCGTTAAGGAGGTTAGATCTAAGTGGAAACAAGTTTAAGAATCTACCTGCTGGCTGCATATCTAATCTTTTGAATTTGGATACTCTGAATATAAATTCTTGCTCGGAACTTCAGTCGTTGCCGCAGATTCCGCCAAGATTATCGCAGATGTATGCAGAAGAATGTGATTCATTGGATACAGTGGAAGGTGAACAATTATCACATCTCTTTGCTTCAACGGACCAGGCGGGAGTGCTTGGGCCACGTGATTATTTCTCACTGATAATTCCTGGAACTGAAGTACCGCCATGGTTTGAGAATCAAATCGATCTTTATCTGAATCATAACTTCGAAGCTCTAGTGATGATAGACATACCTCCTTGTGAAGAAATGTTGGGAATTGGATTATGCACTCGTCTAGAAAGTAACTTTTACTGTTGGTGGCAGTGTAGTCATGCTTATGTTGGACATCCCAATCGCGGAAACCATGCTATGCCAGCGTCTAATTGTAAGGGTGGAAAGAAAAGAAAGTCTTGTCACCTCTGGGTCTCATTTTACAATCCAACAAAGGATGTCCGTGATATGTGGCAATCAAGGAAGAACAATCAGATTCCCTTTGCATTTCGAGCCCCTTCTTACGATGCGGAAGTTTCAATAAAGTGTGGATGGCGTGTCATTCACAAAGTTGATGTTGAAAACGGCAACAGCTCAAAGAATCAAAGTCCCCTTCCAATATTGGAACAACAAATGGACCAAGTTGTTGATCGTAACCCGACACCGACGACAGGCCTTGGGAGCCCATGGCCTTTCCATACTGCATTCACAAAACATGGTCCCATAACGTTCCCAAACCCACCTTCAGGATTGTTGATTAATTACTGCTTAAAGAAGAGGCTCCAATGGAATAGTTGGTTTGCTCGCAAAGTTTGTTATGAAAGTGAATATTATGATGAAGAAATGCTGCGTTACTCACAAAAGAATGTGGCAGTGTGTTCTTCACCGAAATCCCAATTGATCTGTCCTATTGAAAGTCATATATTATATGAACTTTGCGTTGCTTCAACGCCTTATCCGTATATACTCTGTTGCACTTCTTTTAGTAGAGACATCTGGCCTCTGTTTTTGCCGATCATGTTGTTACGTTGA 2448 0.3913 MQKEKSMLKEYGSILVMHDLVEQMGRKIVMDKSSNCVGNRSRLWTNEDIDKVMQNNWGIEEIEGMISSPSCEAFWDPKPFSKLHNLVYQDTREIQGEVSSTSCKAFWDREAFSTLRKLRLLMISSDFHVPVSLKCLSHALKVLYWTKYPLDTLPSGTRLHELVDLRMHHSKLKKLGLCSKNLKFLDLRFSKNLIKTPDFSKLPNLERLELEGCEKLVDLHPSIGQHKKLQVLNLKGCKSLIAHCPKKLEMTALKEFVLYGCIRVKFLPEFGKNMKNLETLDAGETNLVKLPESLGLLTGLKTLKLRGCKNLVCPPQSIHNLKHLVLVDIAGCSKFARLPEKLNEIEALEELDASETDITEIPCSIGGLEKLKKLSFRGCKRSTLNSWSMILSLKHMFWRHSIHKGLTLPPSMFNLKSLTQLDLSYCGFDDGSIPDDLGGLSSLRRLDLSGNKFKNLPAGCISNLLNLDTLNINSCSELQSLPQIPPRLSQMYAEECDSLDTVEGEQLSHLFASTDQAGVLGPRDYFSLIIPGTEVPPWFENQIDLYLNHNFEALVMIDIPPCEEMLGIGLCTRLESNFYCWWQCSHAYVGHPNRGNHAMPASNCKGGKKRKSCHLWVSFYNPTKDVRDMWQSRKNNQIPFAFRAPSYDAEVSIKCGWRVIHKVDVENGNSSKNQSPLPILEQQMDQVVDRNPTPTTGLGSPWPFHTAFTKHGPITFPNPPSGLLINYCLKKRLQWNSWFARKVCYESEYYDEEMLRYSQKNVAVCSSPKSQLICPIESHILYELCVASTPYPYILCCTSFSRDIWPLFLPIMLLR 815
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4448g00033 815 SUPERFAMILY L domain-like 391 503 - -
Pral4448g00033 815 Gene3D Ribonuclease Inhibitor 266 516 IPR032675 -
Pral4448g00033 815 Gene3D Ribonuclease Inhibitor 56 265 IPR032675 -
Pral4448g00033 815 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 274 382 IPR044974 GO:0006952
Pral4448g00033 815 SUPERFAMILY L domain-like 112 399 - -
Pral4448g00033 815 Pfam Leucine Rich Repeat 442 464 IPR001611 GO:0005515
Pral4448g00033 815 SMART LRR_typ_2 274 297 IPR003591 -
Pral4448g00033 815 SMART LRR_typ_2 440 463 IPR003591 -
Pral4448g00033 815 SMART LRR_typ_2 202 226 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4448g00033 Pral-Chr4448 314971 320965 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4448g00033 13 383 WRKY Transcription Factor Family AT4G12020 31.854 9.01e-38 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4448g00033 - - pcin:129302825 694.501