Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4448g00031 ATGGACGATGATGAATCTTTTCAACTCTTTTGTCAAAAAGCATTTAGAGGAAGAGGCATCCCTAATGAACGACAATGGGAGGTGTTGGCTCAATTAGCAATTGATTATACAAGAGGTCTTCCTTTGGCTCTCTATGTTTTGGGTTCCTTCTTTTGTGGCAAAGATAGCTTAACAGAGTGGGATTATGCTTTGCAAGTGTTGATGCAAGATTCGAATAATGACATTTTTAAGAAACTTAGAATAAGCTACTATGAACTGAATTATATAGAAAAGACCCTTAAGGGAAAATCTTTGCTTGCTGAAACTGAGATTGGCAATACTACCTATATAGAGATGCATGATCTGATTCAAGACATGGGTAGGCTTATTGTTAATGAGGAATTTCCTGTTGATGTTGGAAGACACAACAGATTGTGGATTCCTTCTGACATTGACCGACTACTAGAAAGAGATCTGATAAGAAATTAA 468 0.3654 MDDDESFQLFCQKAFRGRGIPNERQWEVLAQLAIDYTRGLPLALYVLGSFFCGKDSLTEWDYALQVLMQDSNNDIFKKLRISYYELNYIEKTLKGKSLLAETEIGNTTYIEMHDLIQDMGRLIVNEEFPVDVGRHNRLWIPSDIDRLLERDLIRN 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4448g00031 155 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 4 144 IPR044974 GO:0006952
Pral4448g00031 155 Pfam NB-ARC domain 2 75 IPR002182 GO:0043531
Pral4448g00031 155 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 92 IPR027417 -
Pral4448g00031 155 Gene3D - 1 87 IPR042197 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4448g00031 Pral-Chr4448 292527 293096 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4448g00031 23 149 WRKY Transcription Factor Family AT5G45050 27.950 4.15e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4448g00031 - - pcin:129298711 139.428