Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4448g00002 ATGGAAGCAAGCAAAGAGGAGGCGCTTAAAGCAATAGAGGTTGCCGAGAAGCGATTTGCTCAGAGAGACTTTGCAGGTGCCAAAAGCTATGCATTAAAGGCAAAAACAATGTGTCCTGAATTGGAGGGAATACCTCAAATGGTGGCTACATTTCAAGTTTATGTAGCTTCTGAGGCAAAATATAATGGCGAAGTAGATTATTATTCAATTCTTGGAATAAAACCTTCAGCAGATAAAGAGACCGTTAGGAAACAGTATAGGAAGCTGGCTGTGTTGCTTCACCCGGATAAGAACAAATGTGTGGGAGCTGACGGGGCCTTTAAGCTGGTATCCGAAGCTTGGACTTGGCTATCAGATGGTGCCATGCGAAGTTCTTATGATCGCAAGAGAAATACACAAACGGCTGCTGGGGTCAATCAGACGAATTTGTCATCAGTCCATTCTGCAGGAACTACAGGTTATAACAAGTGTTTCAATTTACCAACTTCTCATGGTCGGCATGATACTTTCTGGACCATTTGCACTTCATGTAATGTCCAGTATGAGTACTTGCGTAAGTATGTTAATAAGAGACTTTCATGTAAAAACTGTCGGGGAACTTTTGTTGCTGTTGAAACCGGGGCAGCCCCAGCAAATGGTTCTTTCCCTTATACTCCTTGGTCATATGTGCCGGGCAATGGGTATGGAGGTCATTCATTTGATAATGTCACCTATGTGCCTACCAGTACTACCTATTTCAATGGCAATGGTATCACTGGATATCATTCTCCACATGGATATGAGTATGTTTCAAATGTTTCATTTCAGTGGAGTCCTGGTGGACATGTCAATGGAAATGGTTCGACTCCCCTATCTTCTGATTCTGTTTGTAAGGTCAATGGAAATAGGAAGAGAGGAAGACCAAGAATCAAACCACCAGTTGATCAGAGGCATCAATTAGCAGAGACTGTGCACAATGTAAATTCAGATGTATCATTCCACTGTAACGAACCTCAGGAAATTAAGCCCACTAGACCTGACAAAAAAAGGAAAATTGTTGTTGCAGCCAGTTTCCGAAATGCCTGTGAACAAAAGGAATTGAAATCGGCTTCTGAATCAAGATTAGCTGATGGGAATGAAAGCATTGTACATGACCAGAAAGTTTCCTGTGCAAATGAAGTCCAAACTAAGCAGTATTCCGTGGCACCAGCATTTGATGCGAGAAAATTACTGATTGAGAAGGCCAAGGCGGATATTCAGAAGAAACTGGAGGAGATGAAACTGGCATCTGATGCTGCCGCTGTTGGGGAGAAAGCAAAATCTCTAGCAGAAGCTGGTCAAGTCAATAGAGAGGAATATAAAAGAGCATGTCTAAGTGTTTCTGACCATCAATTAGAGCATAGGAAAACTGCTTCCGTCACAATCACTGTCCCGGATTCTGACTTTCATGACTTTGATAAAGACAGGTCAGAGCAGTGCTTTAGGCCAAAGCAAATATGGGCTTTATATGATGAGGAAGATGGCATGCCTCGTTTATATTGTCTAATCCGTGAGGTCATCTCTGTGAATCCATTTAAGATTCATATTAGTTATTTGAACTCAAAGACTGATAGTGAGTTTGGCCCAGTGAACTGGATGGATTCTGGTTTTACGAAATCTTGTGGAAATTTCAGGGCATTCAATTCTGATGTTGTTGACCAGGTAAATGTTTTCTCTCATCTTCTAGCACGGGAGAAGGCTGGTCGAGGTGGTTGTATTCGGATTTATCCGAGATGTGGAGATATTTGGGCTGTTTATCGAAACTGGTCTCCCGACTGGAATAGAGCGACTCCAGATGAAGTGAGGCATCAGTATGAAATGGTGGAGGTTCTTGATGATTACTCTGAGGAGCTTGGTGTTTGTGTTAGTCCCCTTATAAAGCTGGATGGATTTAAAACAGTGTATCAAACAAATTCTGACAAAAAGGCAATTAGATGGATACCGAGAAGAGAAATGCTACGCTTTTCACACCAAGTGCCTTCTTGGTTGCTGAAGGGAGAGACAAGCAACTTGCCAGAAAGGTGTTGGGACCTTGATCCAGCTGCAACTCCTGATGAACTTCTTCATGCTGCTACAATCGCGAATGCTTCATAG 2112 0.4242 MEASKEEALKAIEVAEKRFAQRDFAGAKSYALKAKTMCPELEGIPQMVATFQVYVASEAKYNGEVDYYSILGIKPSADKETVRKQYRKLAVLLHPDKNKCVGADGAFKLVSEAWTWLSDGAMRSSYDRKRNTQTAAGVNQTNLSSVHSAGTTGYNKCFNLPTSHGRHDTFWTICTSCNVQYEYLRKYVNKRLSCKNCRGTFVAVETGAAPANGSFPYTPWSYVPGNGYGGHSFDNVTYVPTSTTYFNGNGITGYHSPHGYEYVSNVSFQWSPGGHVNGNGSTPLSSDSVCKVNGNRKRGRPRIKPPVDQRHQLAETVHNVNSDVSFHCNEPQEIKPTRPDKKRKIVVAASFRNACEQKELKSASESRLADGNESIVHDQKVSCANEVQTKQYSVAPAFDARKLLIEKAKADIQKKLEEMKLASDAAAVGEKAKSLAEAGQVNREEYKRACLSVSDHQLEHRKTASVTITVPDSDFHDFDKDRSEQCFRPKQIWALYDEEDGMPRLYCLIREVISVNPFKIHISYLNSKTDSEFGPVNWMDSGFTKSCGNFRAFNSDVVDQVNVFSHLLAREKAGRGGCIRIYPRCGDIWAVYRNWSPDWNRATPDEVRHQYEMVEVLDDYSEELGVCVSPLIKLDGFKTVYQTNSDKKAIRWIPRREMLRFSHQVPSWLLKGETSNLPERCWDLDPAATPDELLHAATIANAS 703
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4448g00002 703 Pfam Domain of unknown function (DUF3444) 467 673 IPR024593 -
Pral4448g00002 703 PRINTS DnaJ domain signature 102 122 IPR001623 -
Pral4448g00002 703 PRINTS DnaJ domain signature 86 101 IPR001623 -
Pral4448g00002 703 PRINTS DnaJ domain signature 68 86 IPR001623 -
Pral4448g00002 703 Coils Coil 405 425 - -
Pral4448g00002 703 MobiDBLite consensus disorder prediction 278 292 - -
Pral4448g00002 703 CDD DnaJ 66 119 IPR001623 -
Pral4448g00002 703 PANTHER BNAC03G44070D PROTEIN 1 690 - -
Pral4448g00002 703 SMART dnaj_3 65 122 IPR001623 -
Pral4448g00002 703 Pfam DnaJ domain 66 127 IPR001623 -
Pral4448g00002 703 SUPERFAMILY Chaperone J-domain 62 138 IPR036869 -
Pral4448g00002 703 Gene3D DnaJ domain 63 170 IPR036869 -
Pral4448g00002 703 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Pral4448g00002 703 MobiDBLite consensus disorder prediction 278 305 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4448g00002 Pral-Chr4448 9352 13379 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4448g00002 4 305 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 30.211 1.49e-30 121
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4448g00002 - - gmx:100792639 1140.56