Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00037 ATGGAGGATCCGATTGATCAGTACCAAACGAAAAGAGCTAACCCCACTAATTCCACCACGAGATTAAAGCTCTTCGGCTTCAATGTTCAAGAAGATATGGAAGATGAAGTGGTGCTTGAAGATGTATCAGATTCCAACGGCAAGCCTGCCACCCCGTCTGGGTCACAGGATTCCGGCGGCGGCGGAGGAGGTGGCGGTGCGGCGTTCCTTCCTTCCTCCGGTGACAGGAAATACGAGTGTCAGTATTGTTGCCGAGAGTTTGCGAATTCACAAGCGCTTGGTGGGCACCAAAACGCGCACAAGAAGGAGCGTCAGCAGTTAAAGCGAGCGCAGTTGCAAGCCACGCGCAACGCCGCCGTTTCGTTTGTTCGGAACCCCATAATCTCCGCCTTCGCCCCTCCGCCGCATCTCCTGGCACCGAACGGCTCCGTTGTGATGCCGGCGGCTCCGGCCTCCTGGGTTTACATGCCACCACGTTCCGCGCCGTCTCCTTTCCACGTGTCGGTGTCGCACGGCTGTGTATTCCCGTCGTCGCCGCCGAATAACGCTGTGAATTATAGTGGTATCACCGGTGGTAGATCTGCGGGTACAGGGATGGTTTCCTACGGTGGCGGTGCAGGGGATTCGTCATCCACATTGTCGTCCCTGGGGTCGCCGCAAGGACTGTCTCGGGTCAACGGGCGGGTTGACGGGCCTTCCTTGAGTCGGTTCTCCAAGGTGGAAGCTGGGCCGAGCTTCGATGATTCGTTGGGTTTAGACTTGCACCTTAGCCTGGCACCGGCTGCGCCGTGA 792 0.5795 MEDPIDQYQTKRANPTNSTTRLKLFGFNVQEDMEDEVVLEDVSDSNGKPATPSGSQDSGGGGGGGGAAFLPSSGDRKYECQYCCREFANSQALGGHQNAHKKERQQLKRAQLQATRNAAVSFVRNPIISAFAPPPHLLAPNGSVVMPAAPASWVYMPPRSAPSPFHVSVSHGCVFPSSPPNNAVNYSGITGGRSAGTGMVSYGGGAGDSSSTLSSLGSPQGLSRVNGRVDGPSLSRFSKVEAGPSFDDSLGLDLHLSLAPAAP 263
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00037 263 ProSiteProfiles Zinc finger C2H2 type domain profile. 78 105 IPR013087 -
Pral4443g00037 263 FunFam Zinc finger protein GIS3 61 128 - -
Pral4443g00037 263 MobiDBLite consensus disorder prediction 1 20 - -
Pral4443g00037 263 SUPERFAMILY beta-beta-alpha zinc fingers 74 105 IPR036236 -
Pral4443g00037 263 Gene3D Classic Zinc Finger 70 125 - -
Pral4443g00037 263 PANTHER ZINC FINGER PROTEIN 5 11 262 IPR044299 GO:0010090
Pral4443g00037 263 MobiDBLite consensus disorder prediction 202 245 - -
Pral4443g00037 263 ProSitePatterns Zinc finger C2H2 type domain signature. 80 100 IPR013087 -
Pral4443g00037 263 MobiDBLite consensus disorder prediction 37 70 - -
Pral4443g00037 263 MobiDBLite consensus disorder prediction 204 222 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00037 Pral-Chr4443 503037 504178 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00037 17 261 C2H2 Transcription Factor Family AT1G68360 47.860 9.69e-57 180
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00037 - - gmx:102663095 295.819