Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00036 ATGGGGACGGGTTCCAAGATCGATGGACCTTCTACCCCATCAATTCGACGAGACCCTTATGAGGTATTGTCCGTGGCAAGGGACGCAAATGATCAGGAAATAAAAACGGCTTACAGAAAGCTCGCTCTCAAGTATCACCCTGACAAGAATGCTAACAATCCTGAAGCATCAGAGTTATTTAAAGAGGTTGCATATTCTTACAACATCTTATCTGATCCAGAGAAGAGAAGACAGTATGACAGTGCAGGATTTGAGGCACTTGATGCTGATAACTTGGACATGGAAATCGATTTGTCAAATCTTGGAACTGTTAACACAATGTTTGCAGCTTTATTCAGCAAGCTGGGTGTCCCTATCAAGACTACCATCTCAGCAAATGTTCTTGAAGAAGCCCTTAATGGCACAGTTACAGTCAGACCCCTTCCTATTGGAACGTCAGTTAGTGGAAAGGTAGAGAAGCAATGTGCTCATTTTTTTGGTGTGACGATAACTGAGCAGCAAGCTGAGGCCGGGATTGTAATAAGAGTGACTTCAACTGCACAAAGCAAATTCAAACTGCTCTACTTTGAAAATGAGGCAAATGGTGGGTATGGTTTGGCGTTACAGGAAGATAGTGAGAAGACTGGCAAGGTGACATCCGCTGGCATGTATTTCTTACATTTTCAAGTATACAGAATGGATTCAACTGTGAATGCGTTAGCAATGGCGAAGGATCCTGAAGCTGGTTTCTTCAAAAGGTTGGAAGGTCTTCAACCTTGTGAAGTCAAAGAATTAAAGCCTGGCACTCATATATTTGCTGTTTATGGAGATAACTTCTTTAAGACTGCTAACTATACAATTGAAGCTCTTTGTGCAAAATCTTATGAGGATACCTCTCAAAAGCTTAAGGACATCGAAACTCAAATTCTTAGAAAGAGGAATGATTTGCGCCAATTTGAATCAGAATACAGAAAGGCATTGGCACGCTATCAAGAGGTGACTGAAAGATATGCTCAAGAAAAACAATCAGTAGATGAACTTCTGAAACAGAGAGACACTATCCACTCTTCCTTTACCGTCACTAGGTCTCTCTCTGTTAGTGGGAACAGTAGTAATTTAAGTAATGGAAGTAGTAGCAAAATTGCGGGTGAGGATTCCAAGGCAGAGAGCCCTGTGGAAGATGGAAGCTCAGATGGGAAGGATAAATCAGGCAAAAAGAAATGGTTTAACCTCAATCTTAAAGGCTCTGATAAGAGAAATTAA 1242 0.4122 MGTGSKIDGPSTPSIRRDPYEVLSVARDANDQEIKTAYRKLALKYHPDKNANNPEASELFKEVAYSYNILSDPEKRRQYDSAGFEALDADNLDMEIDLSNLGTVNTMFAALFSKLGVPIKTTISANVLEEALNGTVTVRPLPIGTSVSGKVEKQCAHFFGVTITEQQAEAGIVIRVTSTAQSKFKLLYFENEANGGYGLALQEDSEKTGKVTSAGMYFLHFQVYRMDSTVNALAMAKDPEAGFFKRLEGLQPCEVKELKPGTHIFAVYGDNFFKTANYTIEALCAKSYEDTSQKLKDIETQILRKRNDLRQFESEYRKALARYQEVTERYAQEKQSVDELLKQRDTIHSSFTVTRSLSVSGNSSNLSNGSSSKIAGEDSKAESPVEDGSSDGKDKSGKKKWFNLNLKGSDKRN 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00036 413 SMART dnaj_3 17 75 IPR001623 -
Pral4443g00036 413 MobiDBLite consensus disorder prediction 357 377 - -
Pral4443g00036 413 CDD DnaJ 18 72 IPR001623 -
Pral4443g00036 413 MobiDBLite consensus disorder prediction 1 20 - -
Pral4443g00036 413 Coils Coil 288 343 - -
Pral4443g00036 413 FunFam Chaperone protein dnaJ 16 3 100 - -
Pral4443g00036 413 ProSiteProfiles dnaJ domain profile. 18 83 IPR001623 -
Pral4443g00036 413 MobiDBLite consensus disorder prediction 357 413 - -
Pral4443g00036 413 Gene3D DnaJ domain 8 99 IPR036869 -
Pral4443g00036 413 PRINTS DnaJ domain signature 38 53 IPR001623 -
Pral4443g00036 413 PRINTS DnaJ domain signature 55 75 IPR001623 -
Pral4443g00036 413 PRINTS DnaJ domain signature 20 38 IPR001623 -
Pral4443g00036 413 PRINTS DnaJ domain signature 75 94 IPR001623 -
Pral4443g00036 413 Pfam DnaJ domain 18 80 IPR001623 -
Pral4443g00036 413 SUPERFAMILY Chaperone J-domain 17 87 IPR036869 -
Pral4443g00036 413 PANTHER DNAJ DOMAIN (PROKARYOTIC HEAT SHOCK PROTEIN) 14 412 - -
Pral4443g00036 413 ProSitePatterns Nt-dnaJ domain signature. 60 79 IPR018253 -
Pral4443g00036 413 MobiDBLite consensus disorder prediction 379 413 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00036 Pral-Chr4443 483380 490754 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00036 11 91 C2H2 Transcription Factor Family AT1G74250 39.535 4.01e-12 66.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00036 - - cave:132184178 707.597