Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00032 ATGGCGGTATCCTCTCGCCTCTTTCTACTTGTTTCCTTCTTCTTCTTCTTCTTCTTAGTTTCTCATTGTCTTCTTCCCTCTGAAGAGTCCACAAACCGTGATTTAGAAGCTCTCATGGCGTTCAAAGCCGCTTCTGATACGCACAACAAGCTCACATCTTGGAACTCCAGCACCCACCCCTGTAACTGGGTCTTTGTCTCATGCCTCAAGAATCGAGTTTCGCGACTCTTTCTTGAGAATCTCGATCTCCATGGTTCCATCGAGCCGTTAACCTCTCTGACTCAGCTTCGAGTTCTGAGCCTGAAGCGAAACCGTTTTTCCGGTCCCATTCCGAGTATGTCGAATTTTACAGCTCTGAAGCTTCTGTTTCTTTCTCATAATGAGTTCTCTGGTGCGTTTCCGGTGACGGTTACGTCGCTTCTCCGCTTGTATCGCCTTGATCTCTCTCATAACAACTTGTCCGGCGACATCCCGACTACGCTCAACAATCTGAGTCACCTCCTCTCCCTCCGTCTCAATGACAACCAGTTCTCCGGTCACATTCCCATTCTAAACCTCTCCAAACTACAAGACTTCAGTGTCTCCCGTAATCACCTCTCCGGCGAAATACCCAAATCAGTCTCGGGTTTCCCCGCATCATCGTTCGCTCAAAACCCATCTTTATGCGGAGCTCCATTGGTGAAATGTAAGGACATCCATGCCGTACCGATTCAACCCGGATCTATAGGAGCCAATATTTCATCGCCATTGATGCCGCAAAGCAGTCCCTCAACGCCGGCGAAGAATGCAGCGCCCGAAACACCATCTATTAACACTCGCCACCATCATAACGGATCTTCGAAAATGAGACCAGTAATTCTAATCGCCATTATAGTCGGCGACGTCTTGGTTCTGGCTATAGTGTCCCTTCTTCTGTACTGTTGTTTCTGGCAAAACTACTCAGCAAAATTGAGAGAAGGAAACAGGTCGAAGCTTCTGGAAAGCGAGAAGATCTTGTATTCATCAAGCCCATACCCATCAACCCAAGCCGGATTAGAGAGGGGTCAAATGGTGTTCTTCGACGGGATGAAGAAGTTCGAGCTAGAGGACTTGCTTCGAGCTTCTGCAGAAATGCTAGGGAAAGGCGGGTTCGGGACGGCGTATAAAGCCGTTCTTGATGATGGTAATGTCGTGGCAGTGAAGAGGCTTAAGGACGCTCTGATCAATGGGAAGAAGGAGTTCGAACAGCACATGGAAATACTGGGAAGACTAAGACATCCCAATATTGTAAGCTTGAGAGCTTACTATTATGCTCCAGACGAGAGATTGCTGGTCTACGATTACATGACCAATGGTAGCTTGTTTTGGCTCCTTCATGGGAACCGAGGACCCGGAAGAACCCCACTTGATTGGACCACAAGGCTTAAGATAGCCGCCGGAGTGGGCCGAGGCCTGGCCTTCATCCATGGCTCATGTAAGGCCCTTAAGCTCACCCATGGTAACATCAAGTCCACCAACATCCTCATCGACCAGGACGGGGACCCACACGTGGCAGACTTCGGGCTGTCCGTTTTCGCAGCACCGGCCACCAGATCTAACGGCTATCGTGCACCGGAAGCACTGGACGGTAGGAAAAACACGCAGAAATCCGACGTATACTCTTTCGGTGTTCTTCTCCTGGAGCTTCTCACAGGGAAGTGCCCCTCCTTAGGAGAATCGGGTGGGCCCGGAGGAGGCGGGGCCGCGGACCTACCCAGGTGGGTCCAATCGGTGGTGAGAGAGGAATGGACGGCTGAGGTGTTCGACATAGAGCTGATGAGGTACAAGGACATTGAAGAGGAGATGGTAGGGCTGCTTCAGATCGCCATGTCTTGCTGCGCGGCTGGGCCAGATCAACGGCCCAGGATGAGCCACGTGGTGAAGATGATCGAGGACATACGCGGTGTTGAGATATCGCCGAGTCATGACACGTCGGACTCGGTGTCTGAGTCGCCGTCCTTGTCGAGCTAG 1989 0.5123 MAVSSRLFLLVSFFFFFFLVSHCLLPSEESTNRDLEALMAFKAASDTHNKLTSWNSSTHPCNWVFVSCLKNRVSRLFLENLDLHGSIEPLTSLTQLRVLSLKRNRFSGPIPSMSNFTALKLLFLSHNEFSGAFPVTVTSLLRLYRLDLSHNNLSGDIPTTLNNLSHLLSLRLNDNQFSGHIPILNLSKLQDFSVSRNHLSGEIPKSVSGFPASSFAQNPSLCGAPLVKCKDIHAVPIQPGSIGANISSPLMPQSSPSTPAKNAAPETPSINTRHHHNGSSKMRPVILIAIIVGDVLVLAIVSLLLYCCFWQNYSAKLREGNRSKLLESEKILYSSSPYPSTQAGLERGQMVFFDGMKKFELEDLLRASAEMLGKGGFGTAYKAVLDDGNVVAVKRLKDALINGKKEFEQHMEILGRLRHPNIVSLRAYYYAPDERLLVYDYMTNGSLFWLLHGNRGPGRTPLDWTTRLKIAAGVGRGLAFIHGSCKALKLTHGNIKSTNILIDQDGDPHVADFGLSVFAAPATRSNGYRAPEALDGRKNTQKSDVYSFGVLLLELLTGKCPSLGESGGPGGGGAADLPRWVQSVVREEWTAEVFDIELMRYKDIEEEMVGLLQIAMSCCAAGPDQRPRMSHVVKMIEDIRGVEISPSHDTSDSVSESPSLSS 662
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00032 662 Gene3D Transferase(Phosphotransferase) domain 1 442 655 - -
Pral4443g00032 662 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 16 640 IPR046959 -
Pral4443g00032 662 SUPERFAMILY Protein kinase-like (PK-like) 370 636 IPR011009 -
Pral4443g00032 662 Gene3D Ribonuclease Inhibitor 184 230 IPR032675 -
Pral4443g00032 662 Pfam Protein kinase domain 370 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00032 662 MobiDBLite consensus disorder prediction 246 275 - -
Pral4443g00032 662 MobiDBLite consensus disorder prediction 246 278 - -
Pral4443g00032 662 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 442 649 - -
Pral4443g00032 662 FunFam pollen receptor-like kinase 1 339 441 - -
Pral4443g00032 662 Pfam Leucine rich repeat N-terminal domain 32 68 IPR013210 -
Pral4443g00032 662 ProSiteProfiles Protein kinase domain profile. 366 639 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00032 662 ProSitePatterns Protein kinases ATP-binding region signature. 372 394 IPR017441 GO:0005524
Pral4443g00032 662 Gene3D Phosphorylase Kinase; domain 1 340 441 - -
Pral4443g00032 662 CDD STKc_IRAK 372 639 - -
Pral4443g00032 662 Gene3D Ribonuclease Inhibitor 31 183 IPR032675 -
Pral4443g00032 662 FunFam Leucine-rich repeat receptor-like protein kinase 31 183 - -
Pral4443g00032 662 SUPERFAMILY L domain-like 49 224 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00032 Pral-Chr4443 454997 458178 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00032 34 661 Receptor kinase-like Gene Family AT1G68400 64.486 0.0 798
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Pral4443g00032 Pkinase 5e-39 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00032 - - qsa:O6P43_032719 909.442