Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00027 ATGGTTACTCCTGATTCTGTGCTTCCTTTGCTTTGTCTGTGTTGTTTTCTGCTTCCTTTCTCAGTTGCCTGTCCAACAGGGGCTTTTCCCTGTGGACATCTTGGGCAGATCCACTTCCCCTTCTTCGACAACACAACGGACTCATCATGTGGTTTACTACCCATATCAGGCTGTGATGATCCATGGGGACCCAAAAGGGTCCAATTGGGAAGAGAACGGTTCCAGGTTGAGCAAATTTCCCAGGAGGATGATCAACATGTAATCATGATTCGTGACCCCTGGTTTCAAGAGAGCGTATCGAATCCTTGCAGTGTCATCGACTACAAAGTTGCTTTTCACGCGGAGTCTCTTCCTCTGTCTTTCTCTTTTTTAAACGGCATTTCCCTTTTGAAATGCGACGAGCCTCTCGACTACAACAACGTCTTATATCGCTGTGATGGCTACTGCATTTACTATCCTCCCAAAGAAGCTAGTCACTGGCCCGACCCTTCTAAAGGATGTTCTCTTGTCCAGCTTCCAATATTTGAAGCTAAGTTTCCCGGCTCAACCAACATATCCTTATTGGATGAAATCTATATACAAGTGCATCTATCTTTCTCTTGTTTGGATGAGAAATGCGGTGCCCATGAGCTCAAGAAAAACGATTCCAAGCCTATGACACCGGAGTGCAAGAAAATCGATTCCAAGTCTAGAATAATAGGTGTTGCTTTTGCAAGTGCTGCCGTGATTGTAATTAACTTGATTGCTATTCTATTGTGGAACAAGCGAAGATATAATTCTTTAAGCTCACAAAATAAGTCGAGAAGCATTGCACCTGATAATCCTCACTCAAATGCAATCCTAGAAAGTGGAGATATTTACTTTCGTGTCCCTGTTTTCTCCTATGAGGAACTCGAAGAAACAACAGAAAAATTTGATGGAGCAAGAGAACTTGGAAGAGGAGGCTTTGGAACTGTTTACTATGGAAAGCTTAAAGATGGACGAGAAGTTGCTATTAAGCGCTTATTTGAGCGCAACCCTACATGTGTACAACAATTCATGAATGAAGTTAAGATCCTCACACGCTTGTGCCACAGAAACCTTGTGTCGCTGTATGGCTGCACTTCACATGCCAGTCATGAACTGTTGCTGGTTTATGAATACATTCCAAATGGAACTCTTGGTTGTCATCTCCATGGAAATCTAGCAAAACCTGGTTCATTGCAATGGTCTGCGAGGATGAGGATTGCCCTAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTGTGGCATCATTCACCGTGATGTCAAATCCAGCAACCTTCTTCTTGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCCAGGTTGTTTCCTAAGTTTGCATCTCATGTCTCCACACCTCCAGCTGGCACGATAGGTTATTTGGATCCAGAATATCATCAATTCTACCAGCTTACTGAAAAGAGTGATGTTTATAGTTTTGGAGTTGTACTCATTGAGCTGATATCTTCTAAGCCAGCTATCATTAATACAAGGGACAATGATAAGATTAGTTTGGCAAATATGGCAGTTAAGAAGATTCAAAGAAAAGCATTTAATGAGTTGATAGATCCTTCCCTTGGGTTTGAGACAGAGGACAAGGTTAAAGAGATGATAATCTCAGTGGCAAACTTAGCTTTTCAGTGCCTGCAAAGGGATGGGGAGCTAAGACCTTCCATGGATAAAGTAATGGGCTTTCTGCAGAAAATTCAAAACGGGGAGGATGATTATCTTAAGCACCTAGAGTTTCATCGTTCTAGGTTTTCAAATTGGGAGATCCATACATCTCTCCCAACATCAGCACTTTTGGATGGATCGGTTGGATCATTGAACAATTCATTGCCACAGTGCCCTCCCCATACAGTATGA 1899 0.4239 MVTPDSVLPLLCLCCFLLPFSVACPTGAFPCGHLGQIHFPFFDNTTDSSCGLLPISGCDDPWGPKRVQLGRERFQVEQISQEDDQHVIMIRDPWFQESVSNPCSVIDYKVAFHAESLPLSFSFLNGISLLKCDEPLDYNNVLYRCDGYCIYYPPKEASHWPDPSKGCSLVQLPIFEAKFPGSTNISLLDEIYIQVHLSFSCLDEKCGAHELKKNDSKPMTPECKKIDSKSRIIGVAFASAAVIVINLIAILLWNKRRYNSLSSQNKSRSIAPDNPHSNAILESGDIYFRVPVFSYEELEETTEKFDGARELGRGGFGTVYYGKLKDGREVAIKRLFERNPTCVQQFMNEVKILTRLCHRNLVSLYGCTSHASHELLLVYEYIPNGTLGCHLHGNLAKPGSLQWSARMRIALETANALSYLHACGIIHRDVKSSNLLLDHHFCVKVADFGISRLFPKFASHVSTPPAGTIGYLDPEYHQFYQLTEKSDVYSFGVVLIELISSKPAIINTRDNDKISLANMAVKKIQRKAFNELIDPSLGFETEDKVKEMIISVANLAFQCLQRDGELRPSMDKVMGFLQKIQNGEDDYLKHLEFHRSRFSNWEIHTSLPTSALLDGSVGSLNNSLPQCPPHTV 632
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00027 632 SMART serkin_6 305 577 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00027 632 FunFam Wall-associated receptor kinase-like 20 382 589 - -
Pral4443g00027 632 Pfam Protein kinase domain 308 574 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00027 632 CDD STKc_IRAK 311 580 - -
Pral4443g00027 632 SUPERFAMILY Protein kinase-like (PK-like) 286 588 IPR011009 -
Pral4443g00027 632 ProSiteProfiles Protein kinase domain profile. 305 588 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00027 632 ProSitePatterns Protein kinases ATP-binding region signature. 311 333 IPR017441 GO:0005524
Pral4443g00027 632 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 22 585 IPR044652 GO:0004672
Pral4443g00027 632 Gene3D Phosphorylase Kinase; domain 1 282 381 - -
Pral4443g00027 632 Gene3D Transferase(Phosphotransferase) domain 1 382 597 - -
Pral4443g00027 632 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00027 Pral-Chr4443 345308 404789 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00027 29 584 Receptor kinase-like Gene Family AT1G25390 42.832 4.41e-134 405
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00027 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00027 - - pcin:129310591 741.495