Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pral4443g00026 ATGGTTACTCCTGATTCTCTGCTTCCTTTGCTTTGTCTGTGTTGTTATCTGCTTCCTCTCTCAGTTGCCTGTCCACCAGCGCCTTCTCGCTGTGGAAGTCTTGGGGATATTTACTTCCCCTTCTTCGACAACACAACGGGCTCATTTTGTGGTTTACTGCCCATATCAGGTTGTCATGATCCAAGGCAACCCAAAATGATCCAATTGGGAAAAGAATGGTTCCACGTTAAGCAAATACCCCCGAAGGATGACCAACGTGGAATCATGGTTCTTGTCTCCAAGTTTCGAGAGCAATGGAGATCCAACCCCTGCAGCGTCTTTCCTGAGGAGTCTCCTTTGCTGTCTTTCTCCTTTTTAAACGGGACTTCCCTTTTGAAATGCAAGCATCCTCTCGACCACGAGGAACCCTTCGATTACGAGTTAGATCAAAAATGTGATGAATACCACATTTACCACCCTCCCGAGCAAGATAGCCAGTGGCCCGGTCCTTCAAAAGAATGTTCACGTGTGCAGCTTCCATTTGAACCGCCATCTCCTGGCTCATCCGTATTCGATGAAATCTATATTCAAGTAAATGTATCTCTCTCTTGTTTTGGTTGTATTTCCAGAGGAGGGCAATGCCTACCAGACGGCAAATGCAGCGTCCATGAGCACAAGAAAATAGATTCCAAGTCTATCACAATAGGTGTTGCTTTTGCAAGTGCTGCCGTGATTGTAATTAACTTGATTGCTATTCTATTGTGGAACAAGCGAAGATATAATTCTTTAAGCTCACAAAATAAGTCGAGAAGCATTGCACCTGATAATCCTCACTCAAATGCAATCCTAGAAAGTGGAGATATTTACTTTCGTGTCCCTGTTTTCTCCTATGAGGAACTCGAAGAAACAACAGAAAAATTTGATGGAGCAAGAGAACTTGGAAGAGGAGGCTTTGGAACTGTTTACTATGGAAAGCTTAAAGATGGACGAGAAGTTGCTATTAAGCGCTTATTTGAGCGCAACCCTACATGTGTACAACAATTCATGAATGAAGTTAAGATCCTCACACGCTTGTGCCACAGAAACCTTGTGTCGCTGTATGGCTGCACTTCACATGCCAGTCATGAACTGTTGCTGGTTTATGAATACATTCCAAATGGAACTCTTGGTTGTCATCTCCATGGAAATCTAGCAAAACCTGGTTCATTGCAATGGTCTGCGAGGATGAGGATTGCCCTAGAGACAGCAAATGCATTGTCCTATCTCCATGCTTGTGGCATCATTCACCGTGATGTCAAATCCAGCAACCTTCTTCTTGATCACCATTTTTGTGTCAAGGTTGCTGACTTTGGTATTTCCAGGTTGTTTCCTAAGTTTGCATCTCATGTCTCCACACCTCCAGCTGGCACGATAGGTTATTTGGATCCAGAATATCATCAATTCTACCAGCTTACTGAAAAGAGTGATGTTTATAGTTTTGGAGTTGTACTCATTGAGCTGATATCTTCTAAGCCAGCTATCATTAATACAAGGGACAATGATAAGATTAGTTTGGCAAATATGGCAGTTAAGAAGATTCAAAGAAAAGCATTTAATGAGTTGATAGATCCTTCCCTTGGGTTTGAGACAGAGGACAAGGTTAAAGAGATGATAATCTCAGTGGCAAACTTAGCTTTTCAGTGCCTGCAAAGGGATGGGGAGCTAAGACCTTCCATGGATAAAGTAATGGGCTTTCTGCAGAAAATTCAAAACGGGGAGGATGATTATCTTAAGCACCTAGAGTTTCATCGTTCTAGGTTTTCAAATTGGGAGATCCATACATCTCTCCCAACATCAGCACTTTTGGATGGATCGGTTGGATCATTGAACAATTCATTGCCACAGTGCCCTCCCCATACAGTATGA 1884 0.4278 MVTPDSLLPLLCLCCYLLPLSVACPPAPSRCGSLGDIYFPFFDNTTGSFCGLLPISGCHDPRQPKMIQLGKEWFHVKQIPPKDDQRGIMVLVSKFREQWRSNPCSVFPEESPLLSFSFLNGTSLLKCKHPLDHEEPFDYELDQKCDEYHIYHPPEQDSQWPGPSKECSRVQLPFEPPSPGSSVFDEIYIQVNVSLSCFGCISRGGQCLPDGKCSVHEHKKIDSKSITIGVAFASAAVIVINLIAILLWNKRRYNSLSSQNKSRSIAPDNPHSNAILESGDIYFRVPVFSYEELEETTEKFDGARELGRGGFGTVYYGKLKDGREVAIKRLFERNPTCVQQFMNEVKILTRLCHRNLVSLYGCTSHASHELLLVYEYIPNGTLGCHLHGNLAKPGSLQWSARMRIALETANALSYLHACGIIHRDVKSSNLLLDHHFCVKVADFGISRLFPKFASHVSTPPAGTIGYLDPEYHQFYQLTEKSDVYSFGVVLIELISSKPAIINTRDNDKISLANMAVKKIQRKAFNELIDPSLGFETEDKVKEMIISVANLAFQCLQRDGELRPSMDKVMGFLQKIQNGEDDYLKHLEFHRSRFSNWEIHTSLPTSALLDGSVGSLNNSLPQCPPHTV 627
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pral4443g00026 627 ProSiteProfiles Protein kinase domain profile. 300 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00026 627 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524
Pral4443g00026 627 ProSitePatterns Serine/Threonine protein kinases active-site signature. 420 432 IPR008271 GO:0004672|GO:0006468
Pral4443g00026 627 Gene3D Phosphorylase Kinase; domain 1 277 376 - -
Pral4443g00026 627 Pfam Protein kinase domain 303 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00026 627 SUPERFAMILY Protein kinase-like (PK-like) 281 583 IPR011009 -
Pral4443g00026 627 FunFam Wall-associated receptor kinase-like 20 377 584 - -
Pral4443g00026 627 CDD STKc_IRAK 306 575 - -
Pral4443g00026 627 SMART serkin_6 300 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Pral4443g00026 627 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 21 580 IPR044652 GO:0004672
Pral4443g00026 627 Gene3D Transferase(Phosphotransferase) domain 1 377 592 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pral4443g00026 Pral-Chr4443 333982 336574 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pral4443g00026 31 579 Receptor kinase-like Gene Family AT1G25390 42.629 4.26e-136 410
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Pral4443g00026 Pkinase 1.3e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pral4443g00026 - - pcin:129310591 761.525