LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pral4443g00025	ATGCAGGATCAGGATGACCCTCCACCTCCTTTAGCAGCATGTCCAAGGGTTCAGCTCCCAGTGAATATGCTGGCTTTCTCTCCTGATCCCTTTACATTCATAGCTTCTGAATTTCGTGTTGGTATTCAGCTTTCTCCTGGTTGTGCTCAATGTCTTTTTGACAAAGGCTCATGCCGTCTCAACAGCACCAGAGAATTTTATTGTCTCAAAGGTGTTGGAGTGGGATCAGGCATTCTGATATTAGCGTTGCTGCTCTGCTTCGGACTCTACAAACACAAACAGAATGCTATATCCCATGTCAGACTTCGATCAACGAATCAACACCCAAATGATGTAGACCCAGACAGTGGTAGGCTCTTCTTTGGAGTCCCAATCTTCTCCTACACAGAGCTTCAAGGCGCAACCAACAGCTTTGACCCCTCCAAGAAACTTGGAGACGGCGGCTTCGGCTCTGTTTACTATGGAAAGCTCCAAGATGGGCGTGAAGTTGCAGTGAAGCACCTATTCAACCACAACTACAAGCGAGTAGAACAGTTCATGACAGAGGTTGAGATCCTCACTCGCCTGCGTCACAGAAATCTTGTCTGCCTCTATGGCTGCACTTCGCGTCAAAGCCAAGAGCTCCTTCTTGTCTATGAATACATCCCAAATGGCACCCTTGCCAGTCACCTCCGTGGCAGCTCTGCAAATCCTGCATTGTTGACGTGGCCTGTTCGAATCAAAATCGCCATAGAAACTGCCAGTGCTTTGGCTTACCTTCATGCCTCCGGCATCATCCATCGTGATGTCAAAACCAACAACATTCTTCTTGACAAGAACTTCTGTGTTAAGGTTGCAGATTTTGGACTTTCTAGGTTGTTCCCAGATGATGTCTCGCATGTTTCTACGGCTCCACAAGGAACACCAGGCTATCTTGACCCAGAATATCACTATTGCTTTAGGCTTACCGATAAAAGTGACGTGTATAGTTTTGGGGTTGTGCTTATGGAGCTGATATCTTCTATGCCAGCGATTGATATGGGAAGGAACAAAGATGAGATTACCTTGGCGAGTCTTACAACTAGAAAGATTCAGAGGAATGAATTTGAGGAGTTGGTGGATCCATGTTTGGGGATTGAGAAGGATAGTGAGGTGAAAAAGAAGGTGTTTGCAGTGGGAGAATTGGCATTCCAGTGTTTGCAGATAGATAAAGAGATGAGGCCTTCCATTGATGAGGTTTTAGAGCTTTTGAGGAATATCGAAGGTGGGAAAGTAGAAGAAGAAGAAAAAGAGAAGGATACCGGGAAAGACGAAGGTGGTGGTGAAGTTTCAAAGAATAAAGCAGATATAAAAGCACAAGCAATGACTTCAATAAGCTTTGATTAG	1365	0.452	MQDQDDPPPPLAACPRVQLPVNMLAFSPDPFTFIASEFRVGIQLSPGCAQCLFDKGSCRLNSTREFYCLKGVGVGSGILILALLLCFGLYKHKQNAISHVRLRSTNQHPNDVDPDSGRLFFGVPIFSYTELQGATNSFDPSKKLGDGGFGSVYYGKLQDGREVAVKHLFNHNYKRVEQFMTEVEILTRLRHRNLVCLYGCTSRQSQELLLVYEYIPNGTLASHLRGSSANPALLTWPVRIKIAIETASALAYLHASGIIHRDVKTNNILLDKNFCVKVADFGLSRLFPDDVSHVSTAPQGTPGYLDPEYHYCFRLTDKSDVYSFGVVLMELISSMPAIDMGRNKDEITLASLTTRKIQRNEFEELVDPCLGIEKDSEVKKKVFAVGELAFQCLQIDKEMRPSIDEVLELLRNIEGGKVEEEEKEKDTGKDEGGGEVSKNKADIKAQAMTSISFD	454

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pral4443g00025	454	MobiDBLite	consensus disorder prediction	417	454	-	-
	Pral4443g00025	454	SMART	serkin_6	138	410	IPR000719	GO:0004672\|GO:0005524\|GO:0006468
	Pral4443g00025	454	FunFam	Wall-associated receptor kinase-like 20	215	423	-	-
	Pral4443g00025	454	PANTHER	LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4	14	428	IPR044652	GO:0004672
	Pral4443g00025	454	ProSitePatterns	Protein kinases ATP-binding region signature.	144	166	IPR017441	GO:0005524
	Pral4443g00025	454	PRINTS	Tyrosine kinase catalytic domain signature	212	225	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00025	454	PRINTS	Tyrosine kinase catalytic domain signature	252	270	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00025	454	PRINTS	Tyrosine kinase catalytic domain signature	319	341	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00025	454	SUPERFAMILY	Protein kinase-like (PK-like)	120	410	IPR011009	-
	Pral4443g00025	454	ProSitePatterns	Serine/Threonine protein kinases active-site signature.	258	270	IPR008271	GO:0004672\|GO:0006468
	Pral4443g00025	454	Gene3D	Phosphorylase Kinase; domain 1	115	214	-	-
	Pral4443g00025	454	Gene3D	Transferase(Phosphotransferase) domain 1	215	428	-	-
	Pral4443g00025	454	CDD	STKc_IRAK	144	413	-	-
	Pral4443g00025	454	Pfam	Protein tyrosine and serine/threonine kinase	141	409	IPR001245	GO:0004672\|GO:0006468
	Pral4443g00025	454	MobiDBLite	consensus disorder prediction	417	438	-	-
	Pral4443g00025	454	ProSiteProfiles	Protein kinase domain profile.	138	413	IPR000719	GO:0004672\|GO:0005524\|GO:0006468

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pral4443g00025	Pral-Chr4443	312837	314806	Dispersed/Tandem

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Pral4443g00025	11	423	Receptor kinase-like Gene Family	AT1G25390	51.168	1.26e-145	428

Transcription factors information

Select	Regulatory Factors	Family	Gene	Hmm_acc	Hmm_name	E_value	Clan
	PK	RLK-Pelle_WAK_LRK10L-1	Pral4443g00025		PK_Tyr_Ser-Thr	1.5e-48	CL0016

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pral4443g00025	-		-	rcu:8271488	486.493